Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30537
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   1.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   1.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +2

Query: 647 CWEPFNQKCLWF 682
           CW P+   C+W+
Sbjct: 287 CWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +2

Query: 647 CWEPFNQKCLWF 682
           CW P+   C+W+
Sbjct: 287 CWTPYYVMCIWY 298


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 305 GNIVLASFELPESNIDCIPS 246
           GNI +  + +P  NI+ +P+
Sbjct: 151 GNIAMELWNMPRENIEPLPN 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,583
Number of Sequences: 336
Number of extensions: 4514
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)