Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30536
         (785 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047562-1|AAK77294.1|  478|Drosophila melanogaster GH07619p pro...   117   2e-26
AE014296-392|AAF47596.1|  478|Drosophila melanogaster CG1017-PA ...   117   2e-26

>AY047562-1|AAK77294.1|  478|Drosophila melanogaster GH07619p
           protein.
          Length = 478

 Score =  117 bits (281), Expect = 2e-26
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LDKEEDVFKQDFSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKYTHLVDQDTTEFDSAWSN 182
           LD+E DV K+DF+  TL+DHFDKT+LPKVMQVK FGR GRTKYTHLVDQDTT+FDS W  
Sbjct: 387 LDEENDVLKRDFAQATLEDHFDKTILPKVMQVKNFGRCGRTKYTHLVDQDTTKFDSPWYA 446

Query: 183 ETSA-ARLTN-FRGGMKQVFEKPS 248
           E+S+  +  N   GGM+Q F+KP+
Sbjct: 447 ESSSNIKFHNEHAGGMRQQFDKPT 470


>AE014296-392|AAF47596.1|  478|Drosophila melanogaster CG1017-PA
           protein.
          Length = 478

 Score =  117 bits (281), Expect = 2e-26
 Identities = 55/84 (65%), Positives = 67/84 (79%), Gaps = 2/84 (2%)
 Frame = +3

Query: 3   LDKEEDVFKQDFSGPTLDDHFDKTVLPKVMQVKKFGRSGRTKYTHLVDQDTTEFDSAWSN 182
           LD+E DV K+DF+  TL+DHFDKT+LPKVMQVK FGR GRTKYTHLVDQDTT+FDS W  
Sbjct: 387 LDEENDVLKRDFAQATLEDHFDKTILPKVMQVKNFGRCGRTKYTHLVDQDTTKFDSPWYA 446

Query: 183 ETSA-ARLTN-FRGGMKQVFEKPS 248
           E+S+  +  N   GGM+Q F+KP+
Sbjct: 447 ESSSNIKFHNEHAGGMRQQFDKPT 470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,302,935
Number of Sequences: 53049
Number of extensions: 733099
Number of successful extensions: 1282
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)