Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30533
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 109 1e-23
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 109 1e-23
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 109 1e-23
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 107 5e-23
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 104 3e-22
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 95 3e-19
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 95 3e-19
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 40 0.006
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 49 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 108
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 109 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 168
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 169 KKQLMRLRKQA-EKNVEKKIDKYTEV 193
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 48
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 109 bits (261), Expect = 1e-23
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 107 bits (256), Expect = 5e-23
Identities = 55/146 (37%), Positives = 81/146 (55%)
Frame = -1
Query: 511 QLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 332
+LK ++FLRKR N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PP
Sbjct: 51 KLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPP 110
Query: 331 PFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPM 152
P+D V LKP R + ++ + +L+ + + +
Sbjct: 111 PYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRK 170
Query: 151 KRNLRGFTKDAGEKVFEGRQHHFTTI 74
K+ L K A EK E + +T +
Sbjct: 171 KKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 76.6 bits (180), Expect = 8e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRN 50
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 104 bits (250), Expect = 3e-22
Identities = 55/163 (33%), Positives = 87/163 (53%)
Frame = -1
Query: 562 CCGSLRTNQHLWQLL*EQLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTE 383
CC + + + ++ +L ++FLRKR N +P+RGP+HFRAPS++ W+TVRGM+PHKT+
Sbjct: 37 CCEGINISGNFYR---NKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHKTK 93
Query: 382 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRNYCM*ADCPMKLDGNTVMLF 203
RG+ AL RL+ DG PPP+D V LKP R + ++ +
Sbjct: 94 RGQAALDRLKVSDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVT 153
Query: 202 VSLKTRGRARLLRELPMKRNLRGFTKDAGEKVFEGRQHHFTTI 74
+L+ + + + K+ L K A EK E + +T +
Sbjct: 154 ATLEEKRKEKAKIHYRKKKQLMRLRKQA-EKNVEKKIDKYTEV 195
Score = 73.3 bits (172), Expect = 7e-13
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -2
Query: 648 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRN 511
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RN
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRN 50
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 94.7 bits (225), Expect = 3e-19
Identities = 49/134 (36%), Positives = 72/134 (53%)
Frame = -1
Query: 475 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 296
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 295 XXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKRNLRGFTKDAG 116
V LKP R + ++ + +L+ + + + K+ L K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQA- 120
Query: 115 EKVFEGRQHHFTTI 74
EK E + +T +
Sbjct: 121 EKNVEKKIDKYTEV 134
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 94.7 bits (225), Expect = 3e-19
Identities = 49/134 (36%), Positives = 72/134 (53%)
Frame = -1
Query: 475 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 296
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 295 XXXVFCLKPGRNYCM*ADCPMKLDGNTVMLFVSLKTRGRARLLRELPMKRNLRGFTKDAG 116
V LKP R + ++ + +L+ + + + K+ L K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQA- 120
Query: 115 EKVFEGRQHHFTTI 74
EK E + +T +
Sbjct: 121 EKNVEKKIDKYTEV 134
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -1
Query: 403 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRNYCM 251
M+ HKT+RG +L L+ +DG PPP+D V LKP R + +
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAL 51
Score = 36.7 bits (81), Expect = 0.076
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 251 VGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIHQ 126
+GR + E+ WKY+ V LE+KRK KA +K+L R+ +
Sbjct: 52 LGRQAQEVRWKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRK 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,870,925
Number of Sequences: 237096
Number of extensions: 2234284
Number of successful extensions: 15299
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15285
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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