Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30532
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...   136   7e-34
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   4.7  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   8.2  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score =  136 bits (329), Expect = 7e-34
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = +2

Query: 5   DYVVESMEASFRYPMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPFGLNV 184
           D+VVES+EASFRY MD++Y+IQNF+A+PYNREVKP  EAT AYSF+P E+FAGRPFGLN+
Sbjct: 106 DFVVESVEASFRYAMDFSYFIQNFSAVPYNREVKPGHEATVAYSFLPTESFAGRPFGLNI 165

Query: 185 QLNYRDASGNAYQEAVYNQTLNI 253
            LNYRD  GN + EAV+N+T+ I
Sbjct: 166 ALNYRDGRGNQFSEAVFNETVQI 188



 Score = 67.7 bits (158), Expect = 4e-13
 Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
 Frame = +1

Query: 256 EVSEGLDGETFFLYVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGTAS--EVDY 429
           EV EGLDGETFFLYVF                                ETGTAS  +VDY
Sbjct: 190 EVDEGLDGETFFLYVFLAAIVILLLVLGQQFLGSYGKRKRPTAARKVVETGTASTKDVDY 249

Query: 430 DWLPKEIVNQLTKSPK-----TPKQSPRARKER 513
           +W+P E + QL  SPK     +PKQSPR RK +
Sbjct: 250 EWIPSETLKQLQNSPKGAPKSSPKQSPRQRKAK 282


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 236 NQTLNIGKYLKV*MERHSSYMSSLVLVEY 322
           NQ L  G    V  ERH+SY+SS +  E+
Sbjct: 39  NQKLLFGHVKGVNTERHASYISSEIYREF 67


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
          protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 56 CSPLDSGKMPPWILLHS 6
          C P D  K PP +L HS
Sbjct: 21 CPPQDDPKQPPVLLAHS 37


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = +2

Query: 44  PMDYTYYIQNFTALPYNREVKPKQEATFAYSFIPNEAFAGRPF 172
           P+    Y+ NF       E+ P Q  T    FI    F   PF
Sbjct: 291 PLSSNDYVDNFNIFTEFGELTPAQVLTLFNEFINWSEFHQSPF 333


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,729
Number of Sequences: 2352
Number of extensions: 14058
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)