Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30531
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   1.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   1.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   3.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.6  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    23   8.1  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 443  GTQRSYPVRHTRVLGKLPALELASF*GVVHCS---SCWSERLSSPY*NEQENLSYWTRNS 613
            G++  +P R   ++ +LP         V  CS    C  E  SSP   +Q+N+  W    
Sbjct: 864  GSEAGHPYRFQPIVPELPTTTTTM--DVSRCSPKLEC-RESSSSPTARQQQNVVLWPDTI 920

Query: 614  TKRMAKLLK 640
             +  A+++K
Sbjct: 921  DENTARIIK 929


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +2

Query: 443  GTQRSYPVRHTRVLGKLPALELASF*GVVHCS---SCWSERLSSPY*NEQENLSYWTRNS 613
            G++  +P R   ++ +LP         V  CS    C  E  SSP   +Q+N+  W    
Sbjct: 863  GSEAGHPYRFQPIVPELPTTTTTM--DVSRCSPKLEC-RESSSSPTARQQQNVVLWPDTI 919

Query: 614  TKRMAKLLK 640
             +  A+++K
Sbjct: 920  DENTARIIK 928


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 7   CWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEG 126
           C  + D SW++  VDC    Y  RL   +     Q+  +G
Sbjct: 762 CTCYHDQSWSSNVVDCSRAGYDDRLPDQIPMDSTQIYLDG 801


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +2

Query: 32  GLRALLTVWAEHMSEDCRRRFYK 100
           G+R   ++WAE +  +CR+++ +
Sbjct: 770 GIRYASSIWAESLKFECRKQWLR 792


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2

Query: 324 FHFVLDGTTVKLDFHNVXXXXXLFNSFI*VWAMTLT 217
           FH +LD    +LD H        FN++   W    T
Sbjct: 96  FHVMLDNLVAELDGHRPLVIAGDFNAWAVEWGSKRT 131


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 631 LCHPFCGIPCPI 596
           LCH  C  PCP+
Sbjct: 19  LCHGACDEPCPV 30


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,904
Number of Sequences: 2352
Number of extensions: 19093
Number of successful extensions: 71
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)