Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30530
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 187 1e-47
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 186 1e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 184 5e-47
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 177 1e-44
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 85 6e-17
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 85 6e-17
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 85 6e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 84 1e-16
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 83 2e-16
03_01_0034 + 318432-318825,318902-319851 83 2e-16
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 83 2e-16
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 83 2e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 58 1e-08
11_06_0030 - 19415263-19415388,19415649-19415728,19416196-194162... 31 1.4
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 1.9
04_03_0664 + 18501248-18502802,18503370-18505054 30 2.5
09_01_0005 - 193214-193228,193659-193776,193876-194072,194534-19... 29 3.2
07_03_1384 + 26177053-26177227,26178754-26178823,26179427-261794... 29 3.2
02_05_0316 - 27825871-27826509 29 3.2
08_02_0541 + 18369702-18369800,18370934-18371055,18371370-183714... 29 4.3
03_04_0064 - 16977621-16977677,16978485-16978698,16979710-16979822 29 4.3
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 29 4.3
05_05_0013 - 21509307-21509493,21509762-21510123 29 5.7
05_03_0662 + 16732965-16733037,16733310-16733413,16734468-167348... 29 5.7
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 5.7
10_08_0019 - 14167952-14171059 28 7.5
08_01_0496 + 4319646-4320371,4321007-4321045 28 7.5
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 28 7.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 187 bits (455), Expect = 1e-47
Identities = 91/143 (63%), Positives = 104/143 (72%)
Frame = +3
Query: 255 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 434
RFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 243 RFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 302
Query: 435 VKCDPRHGKYMACCMLYRGDVVPKE*TRPSLPSKPSVLSNSSTGVQPVFKVGINYQPTNV 614
KCDPRHGKYMACC++YRGDVVPK+ K FK GINYQP +V
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSV 362
Query: 615 VPGGDLGQRFKRCRSCMFVQTTT 683
VPGGDL + +R CM +T+
Sbjct: 363 VPGGDLA-KVQRA-VCMISNSTS 383
Score = 149 bits (361), Expect = 3e-36
Identities = 65/85 (76%), Positives = 79/85 (92%)
Frame = +1
Query: 1 SVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 180
SVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
Query: 181 DIERPTYTNLNRLIGQIVSSITASL 255
DIERPTYTNLNRL+ Q++SS+TASL
Sbjct: 218 DIERPTYTNLNRLVSQVISSLTASL 242
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 186 bits (454), Expect = 1e-47
Identities = 87/128 (67%), Positives = 97/128 (75%)
Frame = +3
Query: 255 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 434
RFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV EITNA FEP++ M
Sbjct: 243 RFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMM 302
Query: 435 VKCDPRHGKYMACCMLYRGDVVPKE*TRPSLPSKPSVLSNSSTGVQPVFKVGINYQPTNV 614
KCDPRHGKYMACC++YRGDVVPK+ K FK GINYQP +V
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSV 362
Query: 615 VPGGDLGQ 638
VPGGDL +
Sbjct: 363 VPGGDLAK 370
Score = 150 bits (363), Expect = 1e-36
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = +1
Query: 1 SVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 180
SVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 158 SVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
Query: 181 DIERPTYTNLNRLIGQIVSSITASL 255
DIERPTYTNLNRLI QI+SS+T SL
Sbjct: 218 DIERPTYTNLNRLISQIISSLTTSL 242
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 184 bits (449), Expect = 5e-47
Identities = 90/143 (62%), Positives = 103/143 (72%)
Frame = +3
Query: 255 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 434
RFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 243 RFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 302
Query: 435 VKCDPRHGKYMACCMLYRGDVVPKE*TRPSLPSKPSVLSNSSTGVQPVFKVGINYQPTNV 614
KCDPRHGKYMACC++YRGDVVPK+ K FK GINYQP +V
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSV 362
Query: 615 VPGGDLGQRFKRCRSCMFVQTTT 683
VP GDL + +R CM +T+
Sbjct: 363 VPSGDLA-KVQRA-VCMISNSTS 383
Score = 149 bits (361), Expect = 3e-36
Identities = 65/85 (76%), Positives = 79/85 (92%)
Frame = +1
Query: 1 SVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 180
SVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+L
Sbjct: 158 SVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSL 217
Query: 181 DIERPTYTNLNRLIGQIVSSITASL 255
DIERPTYTNLNRL+ Q++SS+TASL
Sbjct: 218 DIERPTYTNLNRLVSQVISSLTASL 242
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 177 bits (430), Expect = 1e-44
Identities = 86/142 (60%), Positives = 97/142 (68%)
Frame = +3
Query: 255 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 434
RFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ SV EITN+ FEPA+ M
Sbjct: 324 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVM 383
Query: 435 VKCDPRHGKYMACCMLYRGDVVPKE*TRPSLPSKPSVLSNSSTGVQPVFKVGINYQPTNV 614
KCDPRHGKYMACC++YRGDVVPK+ K FK GINYQP
Sbjct: 384 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTA 443
Query: 615 VPGGDLGQRFKRCRSCMFVQTT 680
VPGGDL + R CM T
Sbjct: 444 VPGGDLAK--VRRAVCMISNNT 463
Score = 124 bits (298), Expect = 1e-28
Identities = 62/106 (58%), Positives = 77/106 (72%), Gaps = 21/106 (19%)
Frame = +1
Query: 1 SVDYGKKSKLEFAIYPAPQ---------------------VSTAVVEPYNSILTTHTTLE 117
SVDYG+KSKL F IYP+PQ +STAVVEPYNS+L+TH+ +E
Sbjct: 218 SVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIE 277
Query: 118 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 255
H+D ++DNEAIYDIC+R+LDIERPTYTNLNRLI Q++SS+T SL
Sbjct: 278 HTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSL 323
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
PT+ +LN LI +S +T L
Sbjct: 218 ATPTFGDLNHLISATMSGVTCCL 240
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKE 325
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
PT+ +LN LI +S +T L
Sbjct: 218 ATPTFGDLNHLISATMSGVTCCL 240
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKE 325
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/83 (43%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
PT+ +LN LI +S +T L
Sbjct: 218 ATPTFGDLNHLISATMSGVTCCL 240
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKE 325
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 174 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 233
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
P++ +LN LI +S +T L
Sbjct: 234 TNPSFGDLNHLISATMSGVTCCL 256
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 254 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 313
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 314 NMMCAADPRHGRYLTASAMFRGRMSTKE 341
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 338 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 397
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
P++ +LN LI +S +T L
Sbjct: 398 TTPSFGDLNHLISATMSGVTCCL 420
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 418 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 477
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 478 NMMCAADPRHGRYLTASAMFRGKMSTKE 505
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
P++ +LN LI +S +T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKE 325
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 179 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 238
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
P++ +LN LI +S +T L
Sbjct: 239 TTPSFGDLNHLISATMSGVTCCL 261
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 259 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 318
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 319 NMMCAADPRHGRYLTASAMFRGKMSTKE 346
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +1
Query: 7 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
P++ +LN LI +S +T L
Sbjct: 218 TTPSFGDLNHLISATMSGVTCCL 240
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +3
Query: 246 CFFRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 425
C RF G LN DL + NL+P+PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 426 NQMVKCDPRHGKYMACCMLYRGDVVPKE 509
N M DPRHG+Y+ ++RG + KE
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKE 325
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 186
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
Query: 187 ERPTYTNLNRLIGQIVSSITASL 255
PT+ N L+ ++S+ T +L
Sbjct: 221 ANPTFAQTNSLVSTVMSASTTTL 243
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 RFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQ 431
R+ G +N DL +L+P PR HF + Y P+ + + + +V ++ + N
Sbjct: 244 RYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNI 303
Query: 432 MVKCDPRH-----GKYMACCMLYRGDVVPKE 509
MV R+ KY++ + +G+V P +
Sbjct: 304 MVSSYARNKEASQAKYISILNIIQGEVDPTQ 334
>11_06_0030 -
19415263-19415388,19415649-19415728,19416196-19416232,
19416338-19416460,19417195-19417242,19417335-19417378,
19417461-19417506,19417581-19417623,19418329-19418422,
19418503-19418604,19419936-19420014,19420698-19420964
Length = 362
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 512 SLLGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVG 369
S+LG+ +TT ++T + + GV + G+ C G LF+ G
Sbjct: 172 SILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 219
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 133 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 255
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -2
Query: 521 WPRSLLGYDVTTVQHTASHVLAMTGVAFHHLVGGLEAC 408
W R +L +++ ++H + ++ + +++HHL L+AC
Sbjct: 413 WNR-MLRENISNIEHNSEGIMKILRLSYHHLAPHLQAC 449
>09_01_0005 -
193214-193228,193659-193776,193876-194072,194534-195493
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 362 REGLP*TAFRRRDHKRMLRARQPDGEMRPPSWQVHGL 472
REG P RR++ KRML RQP + Q+HG+
Sbjct: 75 REGPPAPEARRKERKRMLMPRQPSHD------QIHGI 105
>07_03_1384 +
26177053-26177227,26178754-26178823,26179427-26179469,
26179888-26179965,26180010-26180027,26180103-26180187,
26180273-26180355,26180489-26180546,26181258-26181368,
26181769-26181826,26182005-26182101,26182585-26182620,
26183107-26183137,26183993-26184046,26184159-26184301,
26184411-26184560,26185084-26185317,26185450-26185509,
26185974-26186204,26186829-26186981
Length = 655
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 216 SHRTDCLLDHCFFRFDGALNVD--LTEFQTNLVPYPRI-HFPLVTYAPVISAEKAYHEQL 386
++ DC C+ R+ G L VD + T++V PRI ++ T P + +H+++
Sbjct: 247 AYPADCRSPSCYMRYPGELFVDSVVDWVATSVVGLPRILYYSKETLGPEFIGKSGHHKEM 306
>02_05_0316 - 27825871-27826509
Length = 212
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -2
Query: 458 AMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDWR 345
A+ V F LV A VC GD + + G+ GRD+ R
Sbjct: 93 ALPVVRFDELVASAPAAVCGGGDCAVCLSGICGRDEVR 130
>08_02_0541 +
18369702-18369800,18370934-18371055,18371370-18371439,
18371530-18371679,18371776-18371911,18372000-18372096,
18372193-18372262
Length = 247
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 626 ASGHHVGWLVVDTDLENRLDTSRRIG*YAWF 534
A+ H+ W V DL +RLD +R+ WF
Sbjct: 202 AASAHLAWQVSTVDLSDRLDCNRKFVSNKWF 232
>03_04_0064 - 16977621-16977677,16978485-16978698,16979710-16979822
Length = 127
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 225 SDETIQVGVGWALNVEITAADVIDGFIVDHEST-VRVLKGCVGGEDRVVGLDD--GSGNL 55
S E GVG L AA +DGFI + T + + K C G+ R+V G G++
Sbjct: 6 SSEIAGFGVGALLVCATIAAQRVDGFIASSQRTSLGMCKKC--GDLRIVACSQCKGVGSV 63
Query: 54 RRG 46
R+G
Sbjct: 64 RKG 66
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 419 LEACVCDLGDGKLFMVGLLGRDDWRVRDQWEVDTGVRHQ 303
L+ C+C DG +GLL W V + ++ T +H+
Sbjct: 28 LKYCLCSTRDGMALTLGLLSVISWGVAEVPQIITNYKHK 66
>05_05_0013 - 21509307-21509493,21509762-21510123
Length = 182
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 386 KLFMVGL--LGRDDWRVRDQWEVDTGVRHQVSLELGEVHIQSA 264
+LF+ GL GR DWR +W V T QV+ + I+ A
Sbjct: 121 RLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQA 163
>05_03_0662 +
16732965-16733037,16733310-16733413,16734468-16734861,
16736291-16736901,16739238-16739289,16739771-16739826,
16739962-16740190,16740980-16741212,16741480-16741740
Length = 670
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 513 TRPSLPSKPSVLSNSSTGVQPVFKVGINYQPTNVVP 620
T P LP++PS S++ ++P+ + N++P VVP
Sbjct: 614 TVPFLPNRPSTKSHNR--IEPMTTLPRNFEPARVVP 647
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 267 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 395
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>10_08_0019 - 14167952-14171059
Length = 1035
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 574 RFSRSVST-TSQPTWCPEATWAKGSNV 651
R S S ST TS+ W PE W K +NV
Sbjct: 13 RCSPSTSTSTSREAWRPEKQWRKATNV 39
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 625 PPGTTLVGW*LIPTLKTGWTPVDELDSTLGFDGSDGRV 512
PP TTL + L W P+ + L FDG +GR+
Sbjct: 31 PPQTTLFK---LTALDAQWIPLPLIQRVLVFDGGEGRI 65
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 434 HLVGGLEACVCDLGDGKLFMVGLLGRDDWRVRDQWEV 324
HLVG L A + DLG ++F+ G DW W++
Sbjct: 83 HLVGDLVALIADLGRPQVFVAG----HDWGAVVAWQL 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,391,041
Number of Sequences: 37544
Number of extensions: 632067
Number of successful extensions: 2011
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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