Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30526
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    27   0.51 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   6.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   8.3  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 114 EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 242
           + G Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGGGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 186 GGGTHRSGQGAFGNMCRGGRMFAPRSPGGVGTVASTS 296
           GGG    G G  G+   GG   + RS  G G +   S
Sbjct: 660 GGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHS 696


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 222 RRHPDRTYEYHHHGH 178
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,180
Number of Sequences: 2352
Number of extensions: 20775
Number of successful extensions: 68
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)