Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30525
(509 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 122 6e-27
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 119 4e-26
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 92 8e-18
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 88 1e-16
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 85 1e-15
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 78 1e-13
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 76 5e-13
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 76 5e-13
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 75 7e-13
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 74 2e-12
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 68 1e-10
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 67 2e-10
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 66 4e-10
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 66 4e-10
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 66 4e-10
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 65 8e-10
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 64 1e-09
UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containin... 64 2e-09
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 63 3e-09
UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3; ... 62 5e-09
UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=... 62 5e-09
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 62 5e-09
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 61 1e-08
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 61 2e-08
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 60 4e-08
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 60 4e-08
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 60 4e-08
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 59 5e-08
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 59 7e-08
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 59 7e-08
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 57 2e-07
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 57 2e-07
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 57 2e-07
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 57 3e-07
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 56 4e-07
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 56 4e-07
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 56 6e-07
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 55 8e-07
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 54 2e-06
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 53 3e-06
UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1; ... 52 8e-06
UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6; T... 50 4e-05
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 49 5e-05
UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2; Thermoprot... 47 3e-04
UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5; Archae... 47 3e-04
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 46 5e-04
UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6; Thermo... 44 0.002
UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillar... 43 0.005
UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6; Haloba... 42 0.008
UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3; ... 38 0.10
UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus... 37 0.23
UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4; Thermo... 37 0.23
UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeu... 36 0.53
UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1; Metallosph... 34 1.6
UniRef50_O33369 Cluster: Uncharacterized protein ORF2; n=5; Neis... 33 3.8
UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:... 32 6.6
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 122 bits (293), Expect = 6e-27
Identities = 51/74 (68%), Positives = 62/74 (83%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
MK+ LC++SGYKIYPGHG+ +VDGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 205 KGQEEEQAKKRTRR 246
KGQ EE +KKRTRR
Sbjct: 61 KGQSEEVSKKRTRR 74
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
+KG SK+ + KFQRAI GASL++I+AKRN KPEV
Sbjct: 60 KKGQSEEVSKKRTRRAVKFQRAITGASLAEILAKRNQKPEV 100
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 119 bits (286), Expect = 4e-26
Identities = 50/74 (67%), Positives = 60/74 (81%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
MK+ LC++SGYKIYPGHG+ + DGK F FLN+KCE+A L +RNPR++ WTVLYRRK K
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 205 KGQEEEQAKKRTRR 246
KGQ EE KKRTRR
Sbjct: 61 KGQSEEIQKKRTRR 74
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
+KG K+ + KFQRAI GASL+DIMAKRN KPEV
Sbjct: 60 KKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 91.9 bits (218), Expect = 8e-18
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +1
Query: 43 AYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEE 222
++SG KIYPG GK ++ D K F F N K E+ L R+NPRK++WT LYRR KKG EE
Sbjct: 7 SFSGQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPRKISWTTLYRRMHKKGISEE 66
Query: 223 QAKKRTRRT 249
AKKRTRRT
Sbjct: 67 VAKKRTRRT 75
Score = 32.3 bits (70), Expect = 6.6
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPE 320
+KG +K+ + K QRAIVGASL I +R+ +PE
Sbjct: 60 KKGISEEVAKKRTRRTVKHQRAIVGASLDVIKERRSQRPE 99
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 87.8 bits (208), Expect = 1e-16
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
MK+ C YSGYKI+PGHGK +V+ DGK FL+ K +RRNPR + WTVLYR K K
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 205 KGQ--EEEQAKKRTRRT 249
KG +E+ +K+T+++
Sbjct: 61 KGTHGQEQVTRKKTKKS 77
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 84.6 bits (200), Expect = 1e-15
Identities = 38/75 (50%), Positives = 51/75 (68%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
MK+ + ++SG KIYPG G V+ D K F F NSK + R+NPR++ WTVL+R+ K
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 205 KGQEEEQAKKRTRRT 249
KG EE AKKR+R+T
Sbjct: 61 KGITEEVAKKRSRKT 75
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
+KG +K+ K K QR I GASL I +R++KPEV
Sbjct: 60 KKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV 100
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 77.8 bits (183), Expect = 1e-13
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +1
Query: 103 KTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRR 246
K F FLN +CE A LMRRNPR+VTWTVLYR K KKG +EE +KKRTRR
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKKRTRR 54
Score = 45.2 bits (102), Expect = 9e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
+KG + SK+ ++ KFQR++ GASL +I+AKRN KPEV
Sbjct: 40 KKGTQEEVSKKRTRRNIKFQRSVQGASLDNILAKRNQKPEV 80
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 75.8 bits (178), Expect = 5e-13
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
+K +CA+SG+KI G+ V++D K+FTF+N K L + NPRKV WT +YR+ K
Sbjct: 3 IKTQVCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPRKVFWTAIYRQLNK 62
Query: 205 KGQEEEQA-KKRTRRTQNSN 261
KGQ+ E KK+TRR N
Sbjct: 63 KGQQNELVEKKKTRRVIKVN 82
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 75.8 bits (178), Expect = 5e-13
Identities = 32/76 (42%), Positives = 47/76 (61%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
MK LC YS +KIYP G V+ D K F F+N+K E+ + NPR + W+++YRR +K
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPRDIRWSMVYRRIYK 60
Query: 205 KGQEEEQAKKRTRRTQ 252
+ AKK+ R+T+
Sbjct: 61 NTTTDVSAKKKARKTK 76
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 75.4 bits (177), Expect = 7e-13
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
+K LC +SG KIYPG G ++ D + F FLNSKC+ + P K+ WT +YR++ K
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHK 62
Query: 205 KGQEEEQAKKRTRRTQ 252
K +E K+R R T+
Sbjct: 63 KDAAQEAVKRRRRATK 78
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 73.7 bits (173), Expect = 2e-12
Identities = 32/74 (43%), Positives = 46/74 (62%)
Frame = +1
Query: 28 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 207
K LC +S YK+YPG G V+ DG+TF FL+ K + H + +TWT ++RRK +K
Sbjct: 4 KTELCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQKVKTSDLTWTPMWRRKNRK 63
Query: 208 GQEEEQAKKRTRRT 249
G + A+ RT+RT
Sbjct: 64 GAYAKAARVRTKRT 77
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
+K LC++S ++IYPGHG+ V DG+ F +LN K A + +++ WTV +RR K
Sbjct: 3 IKTDLCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRAFSARKIKSQEIQWTVAWRRLNK 62
Query: 205 KGQEEEQAKKRTRR 246
K + +E AKKR R
Sbjct: 63 KIKTDEGAKKRRIR 76
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 VPSKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
V + +K LC+YS Y+IYPG G+ V DG+ TFLN KC + + P K+ W+V +R
Sbjct: 4 VKTTIKTDLCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRPVKLKWSVGWR 63
Query: 193 RKFKK-GQEEEQAKKRTRRT 249
R KK + +K+R ++T
Sbjct: 64 RMNKKLTNQGATSKRRNKKT 83
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 66.1 bits (154), Expect = 4e-10
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 148 MRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQ 252
M+RNPRKVTWTVLYRRK +KG EEE +KKRTRRTQ
Sbjct: 1 MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQ 35
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
+KG SK+ + KFQRAIVGASL++I+AKRNMKPEV
Sbjct: 19 RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 66.1 bits (154), Expect = 4e-10
Identities = 30/83 (36%), Positives = 47/83 (56%)
Frame = +1
Query: 1 RHELVPSKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWT 180
R V + +K C ++ Y++YPG GK V DGK + F+N K A H + P K+ W
Sbjct: 4 RMSSVTTTIKTEHCNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKPAKLKWN 63
Query: 181 VLYRRKFKKGQEEEQAKKRTRRT 249
+ +R+ KK Q E +KR+++T
Sbjct: 64 LAWRKANKKFQTELFNRKRSKKT 86
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 66.1 bits (154), Expect = 4e-10
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLY---RRKFKKG 210
C++ GY+I PG GK +V+ DG F +SKCE ++ M RNPRK+ WT +Y + + KK
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKA 66
Query: 211 QEEE 222
QE +
Sbjct: 67 QESQ 70
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 65.3 bits (152), Expect = 8e-10
Identities = 28/56 (50%), Positives = 33/56 (58%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
M+I C + G IYPGHG V+ D K F F SKC + M+RNPRK WT YR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPRKFKWTKAYR 56
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
M++ C + +YPGHG V+ D K F F SKC M+RNPRKV WT YR+
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 205 KGQEEEQAKKRTRRTQN 255
K + A T +N
Sbjct: 61 KEMVYDTALAVTAARRN 77
>UniRef50_UPI00006CCD09 Cluster: Ribosomal protein L24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L24e containing protein - Tetrahymena
thermophila SB210
Length = 158
Score = 64.1 bits (149), Expect = 2e-09
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
++ G C++ Y+IYPG G+ + DG+ F FL K + L + +K+TWT+ RR +K
Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWK 62
Query: 205 KGQEEEQAKKRTRR 246
K + + A+K+ +R
Sbjct: 63 KVKATDIAQKKKKR 76
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 63.3 bits (147), Expect = 3e-09
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C Y IYPGHG T V+ D K F F SKC M+ NPRK WT YR+
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPRKSKWTKAYRK 62
>UniRef50_Q7R991 Cluster: Ribosomal protein L24e, putative; n=3;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 178
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 13 VPSKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
+ + +K C++S Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +R
Sbjct: 4 IKTTVKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWR 63
Query: 193 RKFKKGQEEEQAKKRTRRT 249
R KK + E ++R ++T
Sbjct: 64 RNNKKTKVEATQRRRYKKT 82
>UniRef50_Q4XZ61 Cluster: 60S ribosomal protein L24, putative; n=2;
Plasmodium (Vinckeia)|Rep: 60S ribosomal protein L24,
putative - Plasmodium chabaudi
Length = 130
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/79 (32%), Positives = 47/79 (59%)
Frame = +1
Query: 13 VPSKMKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
+ + +K C++S Y+IYPG G+ + DGK + +L+SK + L ++ K+ WT +R
Sbjct: 4 IKTTVKTEACSFSEYRIYPGRGQKYIAKDGKVYFYLSSKFASLALQKKKAAKLRWTQTWR 63
Query: 193 RKFKKGQEEEQAKKRTRRT 249
R KK + E ++R ++T
Sbjct: 64 RNNKKTKVEATQRRRYKKT 82
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 62.5 bits (145), Expect = 5e-09
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + KIYPGHG V+ D K F F KC A ++NPRKV WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
M+I C Y IYPGHG ++ D + F F SKC + NPRKV WT +YR++
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPRKVKWTKIYRKERN 60
Query: 205 KGQEEEQ 225
K +++
Sbjct: 61 KELNDDK 67
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/77 (41%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR---- 192
M++ C + IYPGHG V+ D K F F SKC M+RNPRKV WT +R
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 193 RKFKKGQEEEQAKKRTR 243
+ K E KKR R
Sbjct: 61 KDMTKDTTFEFEKKRNR 77
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR-KF 201
M I C IYPGHG V+ D K F F SKC + NPRK+ WT YRR +
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPRKIKWTKAYRRLQG 60
Query: 202 KKGQEEEQAKKRTRRTQ 252
K+ + +E + R+ +
Sbjct: 61 KELRNDENLEMELRKNR 77
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 59.7 bits (138), Expect = 4e-08
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M++ C + YPGHG V+ D K F F SKC A RRNPRK+ WT +R+
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRK 57
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 59.3 bits (137), Expect = 5e-08
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
M++ C + +YPGHG V+ D K F F +KC ++NPRK+ WT YR+
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPRKIKWTKAYRKAHG 60
Query: 205 K 207
K
Sbjct: 61 K 61
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 58.8 bits (136), Expect = 7e-08
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 58.8 bits (136), Expect = 7e-08
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + IYPGHG V+ D K F F SKC +RNPRKV WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRK 57
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 219
C+YSG KI PG+GK M + D FLN K +L + NPRK+ WT+ RR +G+E
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPRKIRWTLASRR--ARGKEV 64
Query: 220 -EQAKKRTRR 246
+A++R R
Sbjct: 65 IVKARERVTR 74
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
++I C++ G I+PGHG V+ D K F F SKC + ++NPRK +WT +R
Sbjct: 2 VRIEKCSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPRKFSWTKAFRAAMG 61
Query: 205 K 207
K
Sbjct: 62 K 62
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 57.2 bits (132), Expect = 2e-07
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + +YPGHG V+ D K F F SKC ++RNPRK WT +R+
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRK 57
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = +1
Query: 28 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 207
+I C++ +YPG G V+ D + F F SKC M+RNPRKV WT YR K
Sbjct: 3 RIEHCSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPRKVRWTKTYRLLHNK 62
Query: 208 GQEEEQAKKRTRR 246
+ RR
Sbjct: 63 DMATDTTYDFERR 75
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + YPG G T V+ D K F F SKC ++RNPRKV WT +R+
Sbjct: 1 MRIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPRKVRWTKAFRK 57
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 56.4 bits (130), Expect = 4e-07
Identities = 28/74 (37%), Positives = 35/74 (47%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
M+I C IYPGHG V+ D K F F SKC + NPRK+ WT RR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPRKLKWTKAARRMHG 60
Query: 205 KGQEEEQAKKRTRR 246
K + + + RR
Sbjct: 61 KEMITDDSVEMERR 74
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 56.4 bits (130), Expect = 4e-07
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 195
M+ +C++ GY I PG GK V+ DG+ F F + KCE L ++R PRK+ WT Y R
Sbjct: 1 MEKRVCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPRKLKWTKHYSR 58
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 55.6 bits (128), Expect = 6e-07
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
M++ C + +YP G T V+ D K+F F SKC A M+R PRK+ WT +R
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPRKLKWTKTHR 56
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 55.2 bits (127), Expect = 8e-07
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + IYPGHG V+ D K F F SKC + NPRK WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPRKTRWTKAFRK 57
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/61 (40%), Positives = 30/61 (49%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
M+I C + IY GHG V+ D K F F KC R NPRKV WT + R+
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 205 K 207
K
Sbjct: 61 K 61
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 53.2 bits (122), Expect = 3e-06
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
M+I C + YP G T V+ D +TF F SKC M+R PRK+ WT +R
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPRKLKWTKTHR 56
>UniRef50_A2DJQ1 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 113
Score = 52.0 bits (119), Expect = 8e-06
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 KIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 207
K +C +SG+ + GHG+ ++ D F + K +RNPRK+ WT YR KK
Sbjct: 4 KTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63
Query: 208 GQEEEQA-KKRTRR 246
+ A +KR +R
Sbjct: 64 SVADTAATEKRAQR 77
>UniRef50_Q4Q1W6 Cluster: Ribosomal protein L24, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L24, putative -
Leishmania major
Length = 124
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKV----DGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 207
C +S + ++PGHG+ V TF KC A ++ ++NPR + WT YRR +K
Sbjct: 6 CEFSHFAVHPGHGRRYVPFAFLSTKPVLTFSRPKCFALYMRKKNPRFIPWTRTYRRIHRK 65
Query: 208 GQEEEQAKKRTRR 246
+ ++R R
Sbjct: 66 TTTDRVNRRRAAR 78
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 49.2 bits (112), Expect = 5e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
M+I C + IYPGHG V+ D F F S+C ++NPRK+ +T RR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARR 57
>UniRef50_A3H7X1 Cluster: Ribosomal protein L24E; n=2;
Thermoproteaceae|Rep: Ribosomal protein L24E -
Caldivirga maquilingensis IC-167
Length = 70
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 25 MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRRKF 201
M+I C+Y G I PG+G V+VDG F + +C + + M +NP+K W RR
Sbjct: 1 MRIYNCSYCGRPIPPGYGIMYVRVDGVVLRFCSRRCFVSMVKMGKNPQKQAWVRKIRRAK 60
Query: 202 KKGQEEEQAK 231
Q + +K
Sbjct: 61 SAAQSKSSSK 70
>UniRef50_Q8TVE8 Cluster: 50S ribosomal protein L24e; n=5;
Archaea|Rep: 50S ribosomal protein L24e - Methanopyrus
kandleri
Length = 68
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYR 192
C + G I PG GK VK DG F +SKCE L + R+P+KV WT +R
Sbjct: 7 CDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHR 58
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKK 207
C + G + PG GK +K DG T+ +SKC + + R PR+ WT + + KK
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPRRTEWTEKGKIQLKK 61
>UniRef50_Q980Q6 Cluster: 50S ribosomal protein L24e; n=6;
Thermoprotei|Rep: 50S ribosomal protein L24e -
Sulfolobus solfataricus
Length = 61
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 195
C++ G++I PG G V+ DG F +SKC + L R+P+K WT Y +
Sbjct: 7 CSFCGHEIPPGTGLMYVRNDGTILWFCSSKCRKSMLKYHRDPKKYKWTTRYMK 59
>UniRef50_Q9AVV9 Cluster: 60S ribosomal protein L24; n=1; Guillardia
theta|Rep: 60S ribosomal protein L24 - Guillardia theta
(Cryptomonas phi)
Length = 106
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 37 LCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQE 216
+C + G IYPGHG V F F ++KC+ + + + + WT+ + + K +
Sbjct: 3 ICNFCGIGIYPGHGSMFVTNKFDKFYFCSTKCKKLKKIGKTNKGLKWTIKFSKLNKFNEI 62
Query: 217 EEQAKK 234
Q KK
Sbjct: 63 SNQIKK 68
>UniRef50_P14116 Cluster: 50S ribosomal protein L24e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 67
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 219
C Y G I PG G V DG T F +SKCE + R R + WT R + + ++E
Sbjct: 7 CDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGEAEDE 66
>UniRef50_A2ZTR3 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 202
Score = 38.3 bits (85), Expect = 0.10
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +1
Query: 109 FTFLNSKCEAAHLMRRNPRKVTWTVLYR 192
F F SKC M+RNPRKV WT YR
Sbjct: 67 FRFCRSKCHKNFKMKRNPRKVKWTKAYR 94
>UniRef50_A7DR44 Cluster: Ribosomal protein L24E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L24E - Candidatus Nitrosopumilus maritimus SCM1
Length = 66
Score = 37.1 bits (82), Expect = 0.23
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 189
C + + G G + K DG F ++KC+ L ++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMLAKNDGTVLWFCSAKCKKNALELKRDPRKFKWTKKY 58
>UniRef50_Q9HJ58 Cluster: 50S ribosomal protein L24e; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L24e -
Thermoplasma acidophilum
Length = 67
Score = 37.1 bits (82), Expect = 0.23
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLY 189
C++ G I PG G V+ DG F ++KC + + R PR V WT Y
Sbjct: 7 CSFCGKAIEPGTGIMYVRKDGAILYFCSNKCRKNMIELNRVPRYVKWTNEY 57
>UniRef50_A0RUB6 Cluster: Ribosomal protein L24E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24E - Cenarchaeum
symbiosum
Length = 65
Score = 35.9 bits (79), Expect = 0.53
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEA-AHLMRRNPRKVTWTVLY 189
C + + G G K DG F +SKC +++R+PRK WT Y
Sbjct: 8 CNFCNRPVAKGSGTMFAKNDGTVMWFCSSKCRKNMTVLKRDPRKFKWTGKY 58
>UniRef50_A4YCQ3 Cluster: Ribosomal protein L24E; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
L24E - Metallosphaera sedula DSM 5348
Length = 61
Score = 34.3 bits (75), Expect = 1.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 40 CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHL-MRRNPRKVTWTVLYRR 195
C++ G I P G V+ DG F ++KC L ++ +K+ WT Y R
Sbjct: 7 CSFCGGDIPPATGMMHVRNDGTILWFCSNKCRKYMLKYHKDAKKLKWTTSYSR 59
>UniRef50_O33369 Cluster: Uncharacterized protein ORF2; n=5;
Neisseria|Rep: Uncharacterized protein ORF2 - Neisseria
gonorrhoeae
Length = 417
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -1
Query: 317 RLHITLSHNVTK*STNNRTLEFWVLLVRFFACSSSWPFLNLRLYRTVHVTLRGFLL 150
RL + ++ T N L +W+LL R F C ++ R+Y+ + T+ G ++
Sbjct: 84 RLSLVVAAACTIVEALNLNLGYWILLTRLFVCQPNYTATKSRVYQRIAGTVLGVIV 139
>UniRef50_Q96AX6 Cluster: DENND1B protein; n=2; Homo sapiens|Rep:
DENND1B protein - Homo sapiens (Human)
Length = 166
Score = 32.3 bits (70), Expect = 6.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 186 QDSPCYFTRIPPHQMGGFTF*IQECEGFSI 97
+DSP Y RIPP ++ F F I++ E F +
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFPV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,214,607
Number of Sequences: 1657284
Number of extensions: 7863497
Number of successful extensions: 18290
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 17716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18258
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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