Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30525
         (509 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...   143   1e-34
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...   143   1e-34
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    66   3e-11
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    62   3e-10
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    62   3e-10
BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p pro...    28   6.4  
AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-P...    28   6.4  

>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score =  143 bits (346), Expect = 1e-34
 Identities = 62/76 (81%), Positives = 71/76 (93%)
 Frame = +1

Query: 25  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
           MKIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 205 KGQEEEQAKKRTRRTQ 252
           KG EEE +KKRTRRTQ
Sbjct: 61  KGIEEEASKKRTRRTQ 76



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +3

Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
           +KG     SK+   +  KFQRAIVGASL++I+AKRNMKPEV
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score =  143 bits (346), Expect = 1e-34
 Identities = 62/76 (81%), Positives = 71/76 (93%)
 Frame = +1

Query: 25  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 204
           MKIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 205 KGQEEEQAKKRTRRTQ 252
           KG EEE +KKRTRRTQ
Sbjct: 61  KGIEEEASKKRTRRTQ 76



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +3

Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
           +KG     SK+   +  KFQRAIVGASL++I+AKRNMKPEV
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 148 MRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQ 252
           M+RNPRKVTWTVLYRRK +KG EEE +KKRTRRTQ
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQ 35



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = +3

Query: 201 QKGPRGRTSKETY*KDPKFQRAIVGASLSDIMAKRNMKPEV 323
           +KG     SK+   +  KFQRAIVGASL++I+AKRNMKPEV
Sbjct: 19  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 27/57 (47%), Positives = 33/57 (57%)
 Frame = +1

Query: 25  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
           M+I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 27/57 (47%), Positives = 33/57 (57%)
 Frame = +1

Query: 25  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 195
           M+I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p
           protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 178 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 68
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


>AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-PA
           protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -2

Query: 178 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 68
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,335,195
Number of Sequences: 53049
Number of extensions: 369281
Number of successful extensions: 857
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)