Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30524
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 402 FISYNFFFSKSIKVFDY 452
           F+SYN +  +++  F+Y
Sbjct: 192 FVSYNIYVCQTVSNFEY 208


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 402 FISYNFFFSKSIKVFDY 452
           F+SYN +  +++  F+Y
Sbjct: 118 FVSYNIYVCQTVSNFEY 134


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 35  REIHNTFAFRIYIVTSI 85
           REI+  FAF++ + TS+
Sbjct: 148 REINGIFAFQVLMCTSM 164


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 161 FPVFFLDYEGQLWNVYCSKQ 220
           FP F+ D+E Q +   C  Q
Sbjct: 32  FPNFYNDFEVQRYTWKCENQ 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,722
Number of Sequences: 336
Number of extensions: 1780
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)