Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30524
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   3.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   3.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   3.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   3.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   6.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.1  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 165
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 165
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 165
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 61  SYLYSNFNSFRLQHA**NNLGSTRYVAVTGCVYIP 165
           +Y YSN+N++   +   NN    +Y  +     IP
Sbjct: 88  NYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIP 122


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 8   ITPFPPLAFREIHNTFAFRIYIVTSI 85
           + PFP  AFR+  ++ A+R     S+
Sbjct: 89  LLPFPAAAFRQDVHSAAYRCVASNSV 114


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 8   ITPFPPLAFREIHNTFAFRIYIVTSI 85
           + PFP  AFR+  ++ A+R     S+
Sbjct: 89  LLPFPAAAFRQDVHSAAYRCVASNSV 114


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 80  SIVSDSNMHDKIT 118
           S +SD+N+H KIT
Sbjct: 105 SAISDTNVHLKIT 117


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 162 SRCFSLTTKGSSGMFIAVNSYPQRR 236
           +RC+SL +  +S   I++ ++ Q+R
Sbjct: 213 ARCWSLDSTAASDEDISLTTHQQKR 237


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 181 VKEKHRECKHNLLPRHNVYFLGY 113
           VKE     KH +LPR  ++ L Y
Sbjct: 79  VKEFLSIYKHGMLPRGELFSLYY 101


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 181 VKEKHRECKHNLLPRHNVYFLGY 113
           VKE     KH +LPR  ++ L Y
Sbjct: 79  VKEFLSIYKHGMLPRGELFSLYY 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,440
Number of Sequences: 438
Number of extensions: 2299
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)