Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30522
         (824 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          25   0.96 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           25   0.96 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.0  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 393 SQPRRTKPSCRHSARTWTTS 452
           +QP+RTKP+    ART  TS
Sbjct: 78  TQPQRTKPTAGKRARTAYTS 97


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 393 SQPRRTKPSCRHSARTWTTS 452
           +QP+RTKP+    ART  TS
Sbjct: 69  TQPQRTKPTAGKRARTAYTS 88


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 539 PHYGFFPGAV*PAVTP 586
           P +G FPG   P V+P
Sbjct: 191 PSFGIFPGGAPPLVSP 206


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 121 STILSVIRRK*QWRRTRPF*K*SETIASFMFVLTTATSRWLATIV 255
           STIL+ +R++ QW         ++ I +   V TT T  W    V
Sbjct: 80  STILTTVRKQQQW---------AQLIQNLKVVATTKTKAWFLPFV 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 777 VKFWEKVSFPK 809
           VKFW K  FPK
Sbjct: 400 VKFWTKKGFPK 410


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 602 HTLQLLNREFAPEFYSLKNGLNF 670
           +T+Q++ +  +  F SLK  LNF
Sbjct: 229 YTVQIMAKSESSPFESLKKSLNF 251


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 666 IFQRAVSQCWPLVLRNWVK 722
           +F +  S+ WPL L  W K
Sbjct: 108 LFSQVASR-WPLFLNEWTK 125


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 432 ARTWTTSLNRFSHS*CGDQ 488
           A  WT  ++ FS + CG Q
Sbjct: 424 AMVWTIDMDDFSGTVCGGQ 442


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 143 EESDNGDELDPSESSRK 193
           ++SDN +E  PS  SRK
Sbjct: 39  DDSDNDEEERPSFKSRK 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,342
Number of Sequences: 336
Number of extensions: 4733
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)