Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30522
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119217-1|AAM51077.1|  197|Drosophila melanogaster SD16010p pro...    37   0.029
AE013599-3246|AAF46746.1|  197|Drosophila melanogaster CG15678-P...    37   0.029
AY061370-1|AAL28918.1|  330|Drosophila melanogaster LD29228p pro...    33   0.47 
AE014297-4162|AAF56738.2|  330|Drosophila melanogaster CG12880-P...    33   0.47 

>AY119217-1|AAM51077.1|  197|Drosophila melanogaster SD16010p
           protein.
          Length = 197

 Score = 37.1 bits (82), Expect = 0.029
 Identities = 15/53 (28%), Positives = 32/53 (60%)
 Frame = +3

Query: 126 NIVGNKKKVTMETNSTLLKVVGNNCIVYVRTNYGDIEVVGNDCGWR*RRTTGS 284
           ++VGN K+  +E N+  L+++GN   + +  N G ++V+GN    + +  +G+
Sbjct: 52  DLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQNNSGA 104



 Score = 35.5 bits (78), Expect = 0.089
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +3

Query: 129 IVGNKKKVTMETNSTLLKVVGNNCIVYVRTNYGDIEVVGND 251
           I+GN  ++ +  NS  L+V+GN+  + ++ N G ++  GND
Sbjct: 71  IIGNGNRIRIVNNSGQLQVIGNSTRLKIQNNSGALKYTGND 111


>AE013599-3246|AAF46746.1|  197|Drosophila melanogaster CG15678-PA
           protein.
          Length = 197

 Score = 37.1 bits (82), Expect = 0.029
 Identities = 15/53 (28%), Positives = 32/53 (60%)
 Frame = +3

Query: 126 NIVGNKKKVTMETNSTLLKVVGNNCIVYVRTNYGDIEVVGNDCGWR*RRTTGS 284
           ++VGN K+  +E N+  L+++GN   + +  N G ++V+GN    + +  +G+
Sbjct: 52  DLVGNCKEYRIENNTRDLRIIGNGNRIRIVNNSGQLQVIGNSTRLKIQNNSGA 104



 Score = 35.5 bits (78), Expect = 0.089
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +3

Query: 129 IVGNKKKVTMETNSTLLKVVGNNCIVYVRTNYGDIEVVGND 251
           I+GN  ++ +  NS  L+V+GN+  + ++ N G ++  GND
Sbjct: 71  IIGNGNRIRIVNNSGQLQVIGNSTRLKIQNNSGALKYTGND 111


>AY061370-1|AAL28918.1|  330|Drosophila melanogaster LD29228p
           protein.
          Length = 330

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 293 VGGNGFVNISKRWKGDNVQLLGPNCSLTVAGKLKSAPSYEAQLSPFSKDLDDV 451
           VG + F+N+   W G    LLG  C L +A  ++ A +  A  +P +    DV
Sbjct: 6   VGKHKFINMRPSWMGTAAWLLGLYCLLCIAAMVEGASNSVALAAPTASAAKDV 58


>AE014297-4162|AAF56738.2|  330|Drosophila melanogaster CG12880-PA
           protein.
          Length = 330

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 293 VGGNGFVNISKRWKGDNVQLLGPNCSLTVAGKLKSAPSYEAQLSPFSKDLDDV 451
           VG + F+N+   W G    LLG  C L +A  ++ A +  A  +P +    DV
Sbjct: 6   VGKHKFINMRPSWMGTAAWLLGLYCLLCIAAMVEGASNSVALAAPTASAAKDV 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,345,289
Number of Sequences: 53049
Number of extensions: 902287
Number of successful extensions: 2044
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)