Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30521
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   1.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   4.1  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +3

Query: 297 NPNPVANPKQFPKKNNL----LTENETDTKHSRKKSKN 398
           NP  VA   Q+ K NNL    +   ETD  H+   +KN
Sbjct: 327 NPKSVALKAQYAKDNNLAGVMIWSIETDDLHATCGTKN 364


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 823 PNFSRGSFWLGGWKKAFLERQLT*FGKPWLKTGF 722
           PN++  + W  GWK    +  L    +P +K  F
Sbjct: 668 PNYAEVTDWYTGWKNMLSDELL---AQPTIKENF 698


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,862
Number of Sequences: 336
Number of extensions: 4562
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)