Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30521
         (866 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          27   0.98 
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          27   0.98 
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          27   0.98 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           27   0.98 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   3.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.9  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 703 EKFW*NGF*NYLKIFPPDHPV 641
           EK W + F N L++ P +HPV
Sbjct: 84  EKIWHHTFYNELRVAPEEHPV 104


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 703 EKFW*NGF*NYLKIFPPDHPV 641
           EK W + F N L++ P +HPV
Sbjct: 84  EKIWHHTFYNELRVAPEEHPV 104


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 703 EKFW*NGF*NYLKIFPPDHPV 641
           EK W + F N L++ P +HPV
Sbjct: 84  EKIWHHTFYNELRVAPEEHPV 104


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 26.6 bits (56), Expect = 0.98
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 703 EKFW*NGF*NYLKIFPPDHPV 641
           EK W + F N L++ P +HPV
Sbjct: 84  EKIWHHTFYNELRVAPEEHPV 104


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 823 PNFSRGSFWLGGWKKAFLE 767
           PNF + S W  GWK  F +
Sbjct: 693 PNFDQVSRWYQGWKAQFTD 711


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +1

Query: 103 GSNMIHINTKLKY--EKLDYNAGWIPFFQA--QPGNQLVPCVS 219
           G   +  +  LKY   +L YN  W+P  +A  Q   Q+V  V+
Sbjct: 735 GGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIVQAVT 777


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 127 Y*CVSYLNQFQNQHNISEAKEFQGFSTPDISVTQYI*NHA 8
           Y C   + + +N+  I+E ++    + PDIS       HA
Sbjct: 295 YWCTPAIEELENECRIAEQRQLASPTDPDISALDRQARHA 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,450
Number of Sequences: 2352
Number of extensions: 18754
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)