Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30520
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0) 133 1e-31
SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30) 95 4e-20
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.43
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 31 0.75
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 31 0.99
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05) 29 2.3
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 29 2.3
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 2.3
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_33613| Best HMM Match : PAS (HMM E-Value=0.0083) 29 2.3
SB_58550| Best HMM Match : DUF1065 (HMM E-Value=0.15) 29 3.0
SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41) 29 3.0
SB_57347| Best HMM Match : Caerin_1 (HMM E-Value=7.6) 29 3.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) 29 4.0
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018) 28 5.3
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 28 5.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 5.3
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 28 7.0
SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1) 27 9.2
SB_53807| Best HMM Match : MCM (HMM E-Value=0) 27 9.2
>SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0)
Length = 328
Score = 133 bits (321), Expect = 1e-31
Identities = 65/102 (63%), Positives = 82/102 (80%)
Frame = +3
Query: 255 FNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRA 434
F+AEVHR HIFG HVAEYMRSL ++DE+S+KRQFS YIK GV AD+IE IYK AH+AIRA
Sbjct: 222 FSAEVHRNHIFGKHVAEYMRSLAEEDEESYKRQFSAYIKNGVDADSIEGIYKAAHQAIRA 281
Query: 435 DPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIK 560
DP HKK E KKD V+ KR+ + + +R +R+KQKKA+F++
Sbjct: 282 DPVHKKAE-KKD-VQLKRFHRKKMSRQQRVDRVKQKKAAFLR 321
Score = 119 bits (287), Expect = 2e-27
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +1
Query: 1 LARRLLQRXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 180
LARRLL EYNVE VD PGAFRC+LDVGLART+TGARVFGA+K
Sbjct: 137 LARRLLTMLNLHEIYTGTDDVNGDEYNVESVDGSPGAFRCFLDVGLARTSTGARVFGALK 196
Query: 181 GAVDGGLNVPHSIKRFPGYDAESKN 255
GAVDGGL +PHS+KRFPGYD+ESK+
Sbjct: 197 GAVDGGLEIPHSMKRFPGYDSESKD 221
>SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30)
Length = 113
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/71 (61%), Positives = 50/71 (70%)
Frame = +1
Query: 1 LARRLLQRXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 180
LARRLL + EYNVE +D PGAFRC+LDVGLART+TGARVFGA+K
Sbjct: 42 LARRLLTKLNLHEIYTGTEEVNGDEYNVESIDGSPGAFRCFLDVGLARTSTGARVFGALK 101
Query: 181 GAVDGGLNVPH 213
GAVDGGL +PH
Sbjct: 102 GAVDGGLEIPH 112
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 309 MRSLEQDDEDSFKRQFSKYI----KLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 476
++ EQ ++ FK++ + Y+ K G T D IE KK H D HK+ KK
Sbjct: 345 VKFFEQKQKEEFKKEETDYLDVFKKGGTTKDKIEKKDKKKHHKKHKDKEHKEHHHKKKRS 404
Query: 477 KQKRWEQTQAKLAERKNRIKQK 542
K T + +K+ K K
Sbjct: 405 HSKTSSTTDEEKERKKSETKNK 426
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 429 RADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
R + +K+ KK+ K+K+ E+ AK+ E+K R ++KK
Sbjct: 374 REEKDRLEKKEKKEEEKRKKEEEINAKIEEKKKREEKKK 412
Score = 31.5 bits (68), Expect = 0.57
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +3
Query: 312 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 491
++L Q +E +R +K K + +EA KK E + +KKE K+ K++R
Sbjct: 320 KALRQKEEKEKQRLEAKAAK---EKERLEAKQKKEQERLEKQAEKEKKE-KERLEKKQRE 375
Query: 492 EQTQAKLAERKNRIKQKK 545
E+ + + E+K K+KK
Sbjct: 376 EKDRLEKKEKKEEEKRKK 393
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 390 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
A EA+Y+ + KKK+ KK K+K+ ++ + K ++K + K+KK
Sbjct: 135 AAEALYQAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 186
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 339 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAE 518
S ++S + G D E +K + +KKE KK+ K+K+ E+ + + E
Sbjct: 16 SIDGRWSSKTRKGGKRDEREQEREKKERRKKERKKERKKERKKERKKEKKKERKKERKEE 75
Query: 519 RKNRIKQKKASF 554
RK K+ + F
Sbjct: 76 RKKERKKAEKKF 87
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 447 KKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
+KKE KK+ K+++ E+ + + ERK K+++ K+
Sbjct: 48 RKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKK 86
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 321 EQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK--KDSVKQKRWE 494
+QD+ F QF K +KLG+ D++ K + +R S EL KD V + +
Sbjct: 361 DQDNYKKFYEQFGKNLKLGIHEDSVNR--AKLADLLRYHSSSSGDELTSLKDYVTRMKEN 418
Query: 495 QTQAKLAERKNRIKQKKASFIKR 563
Q +++ + ++F++R
Sbjct: 419 QKDIYFITGESKDQVSHSAFVER 441
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 360 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK-QKRWEQTQAKLAERKNRIK 536
K KL + A+A + + + I D HK ELKK + ++R +A++A+R +
Sbjct: 4497 KDTKLDLEANAEQLVMLEGLSVISPDMKHKIDELKKRTTSVRERMPLVEARVAQRISDAN 4556
Query: 537 QKK 545
Q K
Sbjct: 4557 QSK 4559
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 29.9 bits (64), Expect = 1.7
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Frame = +3
Query: 228 PWL*CRIQKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYI------KLG---- 377
PWL C +Q+F + + GL VA +M ++ + S + F K++ LG
Sbjct: 969 PWLDCLLQEFFIQSDVEKLEGLPVAPFM-DRDKVTKPSAQIGFIKFVLVPLFEALGELFP 1027
Query: 378 VTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERK 524
+ D I + +KA + + ELKK K R EQ QA +AE K
Sbjct: 1028 ILEDHIVSPVRKALDYYVGMGQTMETELKK---KNSREEQQQAVIAEEK 1073
>SB_50387| Best HMM Match : HLH (HMM E-Value=8.2e-05)
Length = 791
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 203 LRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLST 90
+RP PF+ P +RAP A PT+ P P S+
Sbjct: 356 MRPAHIGPFLYPDSRAPFSPLASPTASSDSGHPSPGSS 393
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +3
Query: 309 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEA--IYK--KAHEAIRADPSHKKKELKKDSV 476
M+ + +DS KR+ + GV I+ + K +AH+ A P +KKK KK+
Sbjct: 255 MKKGSKQAKDSAKRKTTVVTSAGVIKKPIKLAKVMKMIRAHKLTPAKPVNKKKNDKKEQT 314
Query: 477 KQKRWEQTQAKLAERKNRIKQKKASFIK 560
+QK E+ + K++ K K +K
Sbjct: 315 QQK--EKKNKINNDVKSKSKSKIVKILK 340
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 303 EYMRSLEQDDEDSFKRQFSKYIKLG-VTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK 479
EY R Q +E F R+ + + G V A ++ Y + + + K KEL+K+ K
Sbjct: 282 EYAREKAQLEESYF-REKEDFQRSGLVQASEVKESYNREKQELEESYKQKIKELQKNFAK 340
Query: 480 QKRWEQTQAKLAERKNRIK 536
+K ++ + + A K I+
Sbjct: 341 EK--QEIEDEYAHEKENIR 357
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 444 HKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
HK K+ K++ K++R +A+ +ERK ++KK
Sbjct: 191 HKDKKKKREESKERRRHSDKAEKSERKREKEEKK 224
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 2.3
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 297 VAEYMRSLEQDDEDSFKRQFSKYIKL------GVTADAIEAIYKKAHEAIRADPSHKKKE 458
VA++ ++ + K++F K +KL +++D I+ + A+ H+ +E
Sbjct: 545 VAQFSCCEVEEAWEELKQKFFKAVKLFGEDPKNLSSDQFFGIFNVFLVSF-AEAKHQNEE 603
Query: 459 LKKDSVKQKRWEQTQAKLAERKNRIKQKKA 548
+KK K++ E+ + LAE+K R +QK A
Sbjct: 604 IKK---KKEAEERKRRALAEQKERDRQKSA 630
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 408 KKAHEAIRADPSHKKKELKKDSVKQKRWEQT 500
KKA EA D +KKE KK K+K E+T
Sbjct: 521 KKAKEATEEDDGEEKKEKKKKKKKKKGKEKT 551
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 387 DAIEAIYKKAHEAI--RADPSHKKKELKKDSVKQKRW----EQTQAKLAERKNRIKQKK 545
+ IEA+ K+A I R + K +E +K +QKR E+ K+AE KNR +Q K
Sbjct: 1209 ERIEALNKEADLLIQRRKEAERKAEEKRKQIERQKRIDEEVERRLQKIAEEKNREEQLK 1267
>SB_33613| Best HMM Match : PAS (HMM E-Value=0.0083)
Length = 624
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 203 LRPPSTAPFIAPKTRAPVVVRAKPTSK*HLNAPGPLST 90
+RP PF+ P +RAP A PT+ P P S+
Sbjct: 222 MRPAHIGPFLYPDSRAPFSPLASPTASSDSGHPSPGSS 259
>SB_58550| Best HMM Match : DUF1065 (HMM E-Value=0.15)
Length = 624
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -2
Query: 496 CSQRFCLTESFFNSFF--LWDGSARMASWAFL*MASIASAVTPSFMY 362
C Q+ C++ S + +W G A W F+ + +A P ++Y
Sbjct: 132 CDQKECVSHSIVQQYVTEIWYGELNWADWKFILLFLVALIFPPLWVY 178
>SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41)
Length = 251
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 390 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQK-RWEQTQAKLAERKNRIKQKKASFIK 560
A+E++ K ++ +KKE D KQK + E+ +A + +R++ +++++A F K
Sbjct: 35 AVESVSTKEDYFMQFMEELEKKE-NSDKEKQKAKMERMEASMRKRESEVREQQAEFAK 91
>SB_57347| Best HMM Match : Caerin_1 (HMM E-Value=7.6)
Length = 152
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 390 AIEAIYKKA--HEAIRADPSHKKKELKKDSVKQKRWEQTQ 503
A+E I++K + RADPSH K L K +V+ E TQ
Sbjct: 40 AVERIFQKVFYYPTTRADPSHFVKPLIKSAVQTTTNELTQ 79
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 402 IYKKAHEAIRADPSHK-KKELKKDSVKQKRWEQTQAKLAERKNRIKQK 542
+ KK H D + K +KEL+++ +K++R+E+ L + N K +
Sbjct: 2593 VLKKLHAIALEDANQKSEKELRREKMKKERYEKDVESLRKEMNDDKNR 2640
>SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)
Length = 315
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 381 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAE 518
T DAI+A K+ +E D + K +K K + W + + LA+
Sbjct: 232 TCDAIKAYLKQVYEEEFYDDIEQSKPIKDPKSKDQLWTEVEMILAQ 277
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 387 DAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAK 509
+AI + +K+H + K KE +KD K+KR E+ + K
Sbjct: 1168 EAIVSKERKSHHDKSSGGKQKSKEHRKDKKKKKRSEEKERK 1208
>SB_48198| Best HMM Match : Aa_trans (HMM E-Value=0.0018)
Length = 288
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 468 DSVKQKRWEQTQAKLAERKNRIKQKK 545
D+V ++R ++ Q K+ E+KN IKQ K
Sbjct: 256 DTVPEERLKELQIKVDEKKNSIKQLK 281
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 429 RADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
R + KKK+ KK K+K+ ++ + K +KN+ K KK +K+
Sbjct: 14 REEKKRKKKKQKKKKKKKKKKKKKKNK-KNKKNKNKNKKKKKMKK 57
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 321 EQDDEDSFKRQFSKYIKLGV--TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 485
E+DD+D F+ Q +K G T + K A E A P+ K+KE KK K+K
Sbjct: 348 EKDDDDDFELQLAKPEPEGKKGTKRGKKKTSKDATEESEA-PNKKRKEKKKKKKKKK 403
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 248 DSAS*PGNLLME*GTLRPPSTAPFIAPKTRAPV 150
D+ P +M T+RPP T F+ T+APV
Sbjct: 1653 DTTVAPETTVMPDTTMRPPKTDVFVTEATKAPV 1685
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/51 (19%), Positives = 33/51 (64%)
Frame = +3
Query: 393 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
++ + KK + + +KK+ +++ ++Q+R Q + ++AE++ R+++++
Sbjct: 203 MDELRKKEERRRKREEKRRKKKEEQERLEQQR-RQREQRIAEKRKRLEEQR 252
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 402 IYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKAS 551
+ ++ EA + KK+E K +KQK E + KL E + R Q++A+
Sbjct: 1166 LQREREEAEHQEAERKKEEEAKQKLKQK--EDARKKLEEVERRKSQQQAA 1213
>SB_4546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -1
Query: 365 VLAELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PG-NLLME*GTLRPPS 189
VL+ S E I + S Q + P+ +S + AS G N + G RPP
Sbjct: 174 VLSRDSRESIRGAFVEDGDYNSQGQPSQLEPIPYSARYHKPASPKGRNSVEPFGGNRPPR 233
Query: 188 TAPFIAPKTRAPVVVRAKP 132
P I PK A V + P
Sbjct: 234 NLPHITPKVPAVQVRISHP 252
>SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1)
Length = 298
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 246 IQKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIK 371
+++ NAE+ RA +++ ++S D+E + R+F + K
Sbjct: 160 VKRGNAEIRRARFRATTISQVVQSFRSDEERNSVRKFIAHYK 201
>SB_53807| Best HMM Match : MCM (HMM E-Value=0)
Length = 789
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +3
Query: 312 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 491
R + DD+D + ++ + + A E Y E I + +++K SV++ W
Sbjct: 53 RGILYDDDDDEEESRPRH-RRRIAERAAEGEYLDEDEMIES--IENLEDMKGHSVRE--W 107
Query: 492 EQTQAKLAERKNRIKQKKASFI 557
QA E KNR KQ +F+
Sbjct: 108 VSMQAPRLEIKNRFKQFLRTFV 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,977,446
Number of Sequences: 59808
Number of extensions: 346899
Number of successful extensions: 1245
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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