Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30520
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   124   2e-30
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.37 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   3.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.5  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   4.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  124 bits (300), Expect = 2e-30
 Identities = 57/85 (67%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   LARRLLQRXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 180
           +ARR+LQ+                EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMK
Sbjct: 105 VARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMK 164

Query: 181 GAVDGGLNVPHSIKRFPGYDAESKN 255
           GAVDGGLN+PHS+KRFPGY AE+K+
Sbjct: 165 GAVDGGLNIPHSVKRFPGYSAENKS 189



 Score =  109 bits (261), Expect = 9e-26
 Identities = 49/94 (52%), Positives = 66/94 (70%)
 Frame = +3

Query: 249 QKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAI 428
           + FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKYI LG+ AD IE IYK AH +I
Sbjct: 188 KSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKNAHASI 247

Query: 429 RADPSHKKKELKKDSVKQKRWEQTQAKLAERKNR 530
           R  P  ++   ++      RW   ++  A R++R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSR 281


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 396 EAIYKKAHEAIRADPSHKKKE 458
           +++Y+K  + +R DP+HK  E
Sbjct: 238 DSVYRKVRDTVRDDPAHKNLE 258


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 396 EAIYKKAHEAIRADPSHK 449
           E +Y+   +AI+ DP+HK
Sbjct: 212 ETVYQMVKDAIKFDPAHK 229


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +3

Query: 405 YKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKA 548
           + K    +RA    +KK L++ + ++KR  + Q    + K  I++ +A
Sbjct: 385 FAKVQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEA 432


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 196 HRQQHPS*LQRHEH 155
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 32  LTPYTLAQQMSQVMNTMLNLSTMDQEHL 115
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,013
Number of Sequences: 2352
Number of extensions: 10613
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)