Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30520
(617 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 94 8e-20
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 34 0.071
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 33 0.12
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 33 0.22
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 0.50
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 31 0.87
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 31 0.87
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 30 1.5
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.5
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 30 1.5
AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical ... 29 2.0
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 29 2.7
Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical p... 29 2.7
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 4.6
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 4.6
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 28 4.6
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 28 4.6
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 28 4.6
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 4.6
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 28 6.1
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 28 6.1
AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical ... 28 6.1
Z83129-4|CAB05642.1| 379|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 27 8.1
AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical... 27 8.1
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 93.9 bits (223), Expect = 8e-20
Identities = 47/104 (45%), Positives = 65/104 (62%)
Frame = +3
Query: 249 QKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAI 428
+++NAE HR I G HVA+YM L+++DED +KRQFSK++ G+ AD + A Y+K H AI
Sbjct: 187 KEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAI 246
Query: 429 RADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIK 560
RAD S K+ K S KR + ERK R+ KKA ++
Sbjct: 247 RADASPAAKKAAKPS---KRHTAKRLTYDERKQRVADKKALLLQ 287
Score = 77.4 bits (182), Expect = 8e-15
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 LARRLLQRXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAM 177
LARR L+ +YNVE D P F+ LD+GLARTTTG+++F M
Sbjct: 105 LARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVM 162
Query: 178 KGAVDGGLNVPHSIKRFPGYDAESK 252
KG DGG+NVPHS RF G+D ESK
Sbjct: 163 KGVADGGINVPHSESRFFGFDQESK 187
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical protein
C34F11.5 protein.
Length = 894
Score = 35.5 bits (78), Expect = 0.031
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +3
Query: 339 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADP--SHKKKELKKDSVKQKRWEQTQAKL 512
+ K++ K +K + EA K+ + IR S KKE +K+ K+K ++++ K
Sbjct: 815 TLKKKMRKKVKQQMLKKMEEAAAKENEKEIRKTKKKSKDKKEGRKEESKEKAHKKSKPKK 874
Query: 513 AERKNRIKQKKASFIKR 563
+ R+ + QKKA K+
Sbjct: 875 SNRRGHMNQKKAKRTKK 891
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 34.3 bits (75), Expect = 0.071
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 384 ADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK--RWEQTQAKLAERKNRIKQKKASFI 557
ADA++ I +K E +P+ KK KK+ K + + E+ + K E+ N+ + KK+
Sbjct: 71 ADAVKKIEEKGEEKKPEEPAKSKKSEKKEKSKNEGSKKEEDKEKEKEKSNKAEDKKSEDP 130
Query: 558 KR 563
K+
Sbjct: 131 KK 132
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 79 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKN 255
N EP++ G F C+L TT+G+R G + L + ++FPG + +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 256 SMLKYTGLTSLVCM 297
++K ++ C+
Sbjct: 128 FIIKTFSISMEECL 141
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +3
Query: 390 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIK 560
A E + KK E R K+KE +KD K+K E+ + K E K R K+K IK
Sbjct: 354 AEEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKE-KEREKRKSKEKIK 409
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 435 DPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
D +KKE KKD ++K+ E+ + K E+K K++K
Sbjct: 160 DKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEK 196
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 435 DPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
D S K+ ++DS + RWE+ + ++KN ++K+
Sbjct: 30 DNSGSNKKAQEDSAELARWEEENRRFEKQKNEAREKR 66
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 30.7 bits (66), Expect = 0.87
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 435 DPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
D S K+ ++DS + RWE+ + ++KN ++K+
Sbjct: 735 DNSGSNKKAQEDSAELARWEEENRRFEKQKNEAREKR 771
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 408 KKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQK 542
+K EA + + +KKE KKD K ++ E+ + K ++K K+K
Sbjct: 174 EKKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKK 218
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 420 EAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
E + + +KK+ KKD K+++ E+ + K + K + K+K+
Sbjct: 182 EEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKE 223
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 309 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKR 488
+ + ++DDE S K + K K E + E R HKK + +K S K+KR
Sbjct: 754 INTADEDDESSKKMKKHKKSKKNKKHHRKEEDGDEDEE--RKRKKHKKHKKEKKSKKEKR 811
Query: 489 WEQTQAKLAERKNRIKQKK 545
E E+K + K++K
Sbjct: 812 DEDEDDLDTEKKEKKKERK 830
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +3
Query: 447 KKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
+KK+ +++ KQK+ E+ KL E++ ++K+K+
Sbjct: 216 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKE 248
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 387 DAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
+ +E K+ E + K K+LK+ K K E+ A+ AE+K + F+K+
Sbjct: 213 EKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFLKK 271
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +3
Query: 447 KKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
+KK+ +++ KQK+ E+ KL E++ ++K+K+
Sbjct: 252 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKE 284
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 387 DAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
+ +E K+ E + K K+LK+ K K E+ A+ AE+K + F+K+
Sbjct: 249 EKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFLKK 307
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/33 (33%), Positives = 24/33 (72%)
Frame = +3
Query: 447 KKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
+KK+ +++ KQK+ E+ KL E++ ++K+K+
Sbjct: 252 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKE 284
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 387 DAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
+ +E K+ E + K K+LK+ K K E+ A+ AE+K + F+K+
Sbjct: 249 EKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKKEKNNGTMDKFLKK 307
>AC024845-7|AAF60849.2| 422|Caenorhabditis elegans Hypothetical
protein Y65B4BL.1 protein.
Length = 422
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 541 FCLILFFLSANLACVCSQRFCLTESFFNSFFLWDGSARMA 422
FCL FL +C C +C +E+FF + S R A
Sbjct: 29 FCLPFMFLIRRSSCFCYASWCWSETFFYTMLPDSPSPRAA 68
>AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical
protein Y5H2B.3 protein.
Length = 182
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 408 KKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
K+A E + + S +KK K+SVK+K E+ +A + KN Q+ IK+
Sbjct: 108 KEAKEQVNKEKSEEKK---KESVKRKSSEKLEAPSKKAKNSEDQENQVAIKK 156
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 312 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD---SVKQ 482
R +D++ + KR K K + ++ + K + + KK+LKK+ + K+
Sbjct: 182 RRQRRDEKRAEKRD--KVDKFEKHKNVLDILMKPSVPMASTSATTSKKDLKKEKPMTEKE 239
Query: 483 K-RWEQTQAKLAERKNRIKQK 542
K RWE+ AK ER KQK
Sbjct: 240 KERWEKQDAKRKERNMIRKQK 260
>Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical
protein F46B6.3a protein.
Length = 329
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 312 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD---SVKQ 482
R +D++ + KR K K + ++ + K + + KK+LKK+ + K+
Sbjct: 182 RRQRRDEKRAEKRD--KVDKFEKHKNVLDILMKPSVPMASTSATTSKKDLKKEKPMTEKE 239
Query: 483 K-RWEQTQAKLAERKNRIKQK 542
K RWE+ AK ER KQK
Sbjct: 240 KERWEKQDAKRKERNMIRKQK 260
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +3
Query: 303 EYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQ 482
E + E+ +D K+ K K + + I K + +++ KK E K+D K+
Sbjct: 71 EEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKE 130
Query: 483 KRWEQTQAKLAERKNRIKQKK 545
+ E+++ + ++K+ +K KK
Sbjct: 131 ESKEKSKDE-EKKKDEVKDKK 150
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 294 HVAEYMRSLEQD---DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK 464
H E R L +D +ED Q KL T D +E ++ A RAD +K++++
Sbjct: 1007 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRA-RADLDKQKRKVE 1065
Query: 465 KD-SVKQKRWEQTQAKLAERKNRIKQKKA 548
+ + Q+ +++ + + +N +K+K++
Sbjct: 1066 GELKIAQENIDESGRQRHDLENNLKKKES 1094
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 294 HVAEYMRSLEQD---DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK 464
H E R L +D +ED Q KL T D +E ++ A RAD +K++++
Sbjct: 1007 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRA-RADLDKQKRKVE 1065
Query: 465 KD-SVKQKRWEQTQAKLAERKNRIKQKKA 548
+ + Q+ +++ + + +N +K+K++
Sbjct: 1066 GELKIAQENIDESGRQRHDLENNLKKKES 1094
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +3
Query: 402 IYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQK 542
+ ++ E R K+KE++ + + ++WE+ Q K+ E +R K++
Sbjct: 299 LQQQIEENKRRKEIEKQKEIELEQREIRKWEEYQKKIREEDDREKRQ 345
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +3
Query: 402 IYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQK 542
+ ++ E R K+KE++ + + ++WE+ Q K+ E +R K++
Sbjct: 299 LQQQIEENKRRKEIEKQKEIELEQREIRKWEEYQKKIREEDDREKRQ 345
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 408 KKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFIKR 563
K A E + KK+ KKD K ++ ++ + K + K K KK+ KR
Sbjct: 120 KDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKR 171
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/40 (25%), Positives = 25/40 (62%)
Frame = +3
Query: 423 AIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQK 542
+++ + H+K++ K+ K+K+ E+ Q K + + +K+K
Sbjct: 1047 SLKKEKKHRKEDHPKEKEKEKKKEKEQEKSTDSEKDLKRK 1086
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 384 ADAIEAIYKKAH--EAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFI 557
+D + YK +H E +R + K+E K +VKQ W++ +A L ++ + K+ I
Sbjct: 421 SDIHNSFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKI 479
Query: 558 K 560
+
Sbjct: 480 R 480
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 384 ADAIEAIYKKAH--EAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKASFI 557
+D + YK +H E +R + K+E K +VKQ W++ +A L ++ + K+ I
Sbjct: 421 SDIHNSFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKI 479
Query: 558 K 560
+
Sbjct: 480 R 480
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 294 HVAEYMRSLEQD---DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK 464
H E R L +D +ED Q KL T D +E ++ A RAD +K++++
Sbjct: 1010 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRA-RADLDKQKRKVE 1068
Query: 465 KD-SVKQKRWEQTQAKLAERKNRIKQKKA 548
+ + Q+ +++ + + +N +K+K++
Sbjct: 1069 GELKIAQENIDESGRQRHDLENNLKKKES 1097
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 EAIRADPSHKKKELKKDSVKQ-KRWEQTQAKLAERKNRIKQKK 545
E + + +KKE KKD K+ K+ E+ + K E+K K++K
Sbjct: 147 EEKKEEKKEEKKEDKKDDKKEAKKEEKKEEKKEEKKEEKKEEK 189
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 EAIRADPSHKKKELKKDSVK-QKRWEQTQAKLAERKNRIKQKK 545
E + D KKE KK+ K +K+ E+ + K E+K K++K
Sbjct: 155 EEKKEDKKDDKKEAKKEEKKEEKKEEKKEEKKEEKKEEKKEEK 197
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 387 DAIEAIYKKAHEAIRADPSHKKKELKKDSVK-QKRWEQTQAKLAERKNRIKQKK 545
D EA ++ E + + +KKE KK+ K +K E + K E+K+ K++K
Sbjct: 164 DKKEAKKEEKKEEKKEEKKEEKKEEKKEEKKEEKNDENKEEKKEEKKDEKKEEK 217
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 348 RQFSKYIKLGVTADAIEAIYKKAHE--AIRADPSHKKKELKKDSVKQKRWEQTQAK--LA 515
R+ S YI LG+++ + + KKA+ A++ P + K+ +QK + QA L
Sbjct: 4 REDSPYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILT 63
Query: 516 ERKNR 530
++K R
Sbjct: 64 DKKKR 68
>AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical
protein F57H12.5 protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 447 KKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
KK+ELK+ K+K+ E+ + + +RK K+ K
Sbjct: 115 KKEELKEKKEKEKKDEEKRERQEDRKEERKENK 147
>Z83129-4|CAB05642.1| 379|Caenorhabditis elegans Hypothetical
protein W06G6.7 protein.
Length = 379
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 441 SHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKK 545
SH + +K K WE T ++++E+ ++IKQ+K
Sbjct: 12 SHTLRLIKNKRTTSK-WEDTISRISEKASQIKQQK 45
>Z78016-4|CAC42335.1| 359|Caenorhabditis elegans Hypothetical
protein R186.7 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 354 FSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRI 533
F K K + E + KK E + D +K+E K D + ++R ++ + K +RK +
Sbjct: 175 FKKTEKKTTQQEKQEEVEKKLEETKKKDFESRKEE-KHDLLNKRREQEKELKSLQRKKAL 233
Query: 534 KQ 539
Q
Sbjct: 234 IQ 235
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.5 bits (58), Expect = 8.1
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 303 EYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKK-KELKKDSVK 479
EY EQ K + K K GV D E + KK + SHK+ KE+ K S K
Sbjct: 293 EYPYDWEQSLMKKTKEEQEKK-KKGVV-DQTEKVIKKKEVELAEGKSHKETKEVTKVS-K 349
Query: 480 QKRWEQTQAKLAERKNRIKQK 542
+ E+ + K E+K K+K
Sbjct: 350 EIVEEKKEEKKEEKKEEKKEK 370
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 402 IYKKAHEAIRADPSHKKKELKKDSVKQKRWEQTQAKLAERKNRIKQKKA 548
I++ + R D K +ELKKD+ K ++ Q +AK K KQKKA
Sbjct: 404 IFRTKAQVRRIDAEKKYEELKKDN-KLDKYLQRKAK----KESAKQKKA 447
>AF040643-12|AAB94964.2| 658|Caenorhabditis elegans Hypothetical
protein F14D2.9 protein.
Length = 658
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 336 DSFKRQFSKYIKLGVTADAIEAIYKKAHE 422
D R S+YIK T+D IE + KK +E
Sbjct: 408 DDLVRVSSEYIKFPTTSDEIETMTKKFYE 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,583,956
Number of Sequences: 27780
Number of extensions: 256011
Number of successful extensions: 1100
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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