Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30520
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 25 0.59
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 25 0.59
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 25 0.59
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 25 0.59
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 25 0.78
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 25 0.78
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 0.78
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 25 0.78
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.3
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 9.6
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.59
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 132
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 133 VSMQEQIP 140
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.59
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 132
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 133 VSMQEQIP 140
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.59
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 132
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 133 VSMQEQIP 140
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 25.0 bits (52), Expect = 0.59
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 74 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 132
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 133 VSMQEQIP 140
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.78
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 365
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 366 VSIQEQIP 373
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.78
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 365
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 366 VSIQEQIP 373
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.78
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 307 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 365
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 366 VSIQEQIP 373
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 0.78
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = -1
Query: 356 ELSLERILIILFKTSHVFSNMQTKDVSPVYFSIEFLDSAS*PGNLLME*GTLRPPSTAPF 177
E S E +I ++ ++N + P+Y++I +++ P + G P PF
Sbjct: 296 EKSKEPKIISSLSNNYNYNNYNN-NYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPF 354
Query: 176 IAPKTRAP 153
++ + + P
Sbjct: 355 VSIQEQIP 362
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 216 GMRNIEATVNSTLHSSKD 163
GM NIE + +T +SSK+
Sbjct: 193 GMNNIETYIVNTNYSSKN 210
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 515 REEKQNQAKEGFLH 556
RE+ ++ KEG+LH
Sbjct: 690 REQTESDDKEGYLH 703
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +3
Query: 381 TADAIE-AIYKKAHEAIRADP 440
T IE A KK H AIR +P
Sbjct: 619 TVQVIEDAAQKKKHRAIRPEP 639
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 216 GMRNIEATVNSTLHSSK 166
GM NIE + +T +SSK
Sbjct: 193 GMNNIETYIVNTNYSSK 209
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 407 VDGFNSICSDS*FYVLAELSLERILI 330
VD F S+C+ F L E L I++
Sbjct: 307 VDAFMSVCTVFVFMALMEYCLVNIVL 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,569
Number of Sequences: 438
Number of extensions: 2622
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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