Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30519
(717 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0019 + 19862171-19863049 33 0.23
11_06_0736 - 26784531-26785814 33 0.30
12_01_0889 - 8567209-8567490,8567539-8568009,8568116-8568136 31 1.2
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 31 1.2
10_02_0144 + 5815403-5815520,5815551-5816314 30 1.6
03_04_0175 - 18092055-18092583,18092819-18093378 29 2.8
02_01_0286 + 1921049-1921726 29 2.8
12_02_0279 - 16704284-16704925 29 3.7
12_02_0043 + 12762257-12762678,12762751-12762778 29 3.7
06_03_0981 + 26527005-26527260,26527457-26527770 29 3.7
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 3.7
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 4.9
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 4.9
09_04_0093 - 14550806-14552452 28 6.4
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 28 6.4
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 28 6.4
04_02_0023 + 8655524-8655653,8655742-8656475,8656553-8656918,865... 28 6.4
02_05_0686 - 30900748-30902167,30903442-30904742 28 6.4
02_04_0021 + 18975992-18976408 24 8.4
12_02_0779 + 23082577-23082903,23083347-23083543,23084346-230844... 28 8.5
11_01_0087 - 654461-654912,655878-657186,659080-659187 28 8.5
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 8.5
06_03_0417 + 20576716-20576742,20578110-20578345,20578347-205786... 28 8.5
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 28 8.5
05_04_0057 + 17543016-17543312 28 8.5
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575... 28 8.5
03_01_0528 + 3966687-3967643 28 8.5
>03_05_0019 + 19862171-19863049
Length = 292
Score = 33.1 bits (72), Expect = 0.23
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3
Query: 340 SKRPAEPQPRGTRRTEPPYPP 278
+KRP EP P+ T+R +PP PP
Sbjct: 173 AKRPPEPPPKTTQRQQPPGPP 193
>11_06_0736 - 26784531-26785814
Length = 427
Score = 32.7 bits (71), Expect = 0.30
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 319 VALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAGEWDTQTIKEMLD-HQVR 495
V +D N + A VG+L+ A + P N + + + + L +Q
Sbjct: 26 VMTMDRPNVAVAAVGLLVAAVAATLPAPSWGQQQPANKLITSTSGSGKGLSKWLAMNQEE 85
Query: 496 LVEEKSYTKISTRKAQERRGAPADARALSTSPSTSTWILAFPGTRGDS 639
VE+K+ ++T A+E G DA + + TW++ GT GD+
Sbjct: 86 YVEKKALHTMAT--AEELGGKKLDANLTAAEEAKVTWVIDPKGTPGDT 131
>12_01_0889 - 8567209-8567490,8567539-8568009,8568116-8568136
Length = 257
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 122 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 220
D+RF ++D E++E P+++P +P+P PS
Sbjct: 166 DLRFIQKDSGETLEFHSKEPLSQPPIEPEPCPS 198
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 324 SAGRFERIVRWSRSPDTSSSRHDWRSHRLQVRPGQ-FESKSRRMGHPDHQGNAGPPSETR 500
S R R S SP S +R D+R HR PG+ + H G + P E
Sbjct: 166 SVSRSPRSRYHSYSPSPSPARRDYRDHRDDYSPGESLSPHGQDKRHHRSNGRSASPDELE 225
Query: 501 R 503
R
Sbjct: 226 R 226
>10_02_0144 + 5815403-5815520,5815551-5816314
Length = 293
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +1
Query: 394 GAHIAYKYAPGNLRARAGEWDTQTIKEMLDHQVRLVEEKSYTKISTRKAQERRGAPAD 567
G+ +A A LR AG+ +KE + RLVEE TK + + + R A AD
Sbjct: 216 GSSVAMPAAEARLRVAAGQLPDPVVKEGDEQYRRLVEE---TKSAAGRERRRESAVAD 270
>03_04_0175 - 18092055-18092583,18092819-18093378
Length = 362
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 122 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 220
D+RF ++D E++E+ P ++P +P+P PS
Sbjct: 226 DLRFIQKDSGETLELHSKEPPSQPPIEPEPCPS 258
>02_01_0286 + 1921049-1921726
Length = 225
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +3
Query: 333 RFERIVRWSRSPDTSSSRHDWR-SHRLQVRPGQFESKSRRMGHPDHQGNAGPPSETRRGK 509
R ER+VR RS D S R WR + Q R Q RR + ++G + R +
Sbjct: 52 RKERLVRRRRSLDESEGRPGWRATSPCQGRRRQRRPALRRDDRGSWRRHSGGNAIGLRQE 111
Query: 510 IIHEDFNTKSSRTTWRSCGC 569
F K R R C C
Sbjct: 112 RASGGFPVKRRRRRGRGCTC 131
>12_02_0279 - 16704284-16704925
Length = 213
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 137 EEDCQESVEICCTNPITEPVPKPQPDPSKLKG 232
+ED E++E+ P ++P KP+P PS +G
Sbjct: 72 KEDSGETLELLSREPASQPPIKPKPCPSGSQG 103
>12_02_0043 + 12762257-12762678,12762751-12762778
Length = 149
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 122 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 220
D+ F +ED E++E+ P ++P +P+P PS
Sbjct: 17 DLHFIQEDSGETLELHSKEPPSQPPIEPEPCPS 49
>06_03_0981 + 26527005-26527260,26527457-26527770
Length = 189
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 158 VEICCTNPITEPVPKPQPDPSKLKGCGYRNPMGSE-*PSPEGWVRRLSSASSPG 316
VE+ C P+P P P + + C R G P+ + W RR SS G
Sbjct: 54 VELACAALAGSGRPRPVPSPPRQRACLCRYGRGENLVPASDEWRRRYDVVSSFG 107
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +3
Query: 420 PGQFESKSR--RMGHPDHQGNAGPPSETRRGKIIHEDFNTKSSRTTWRSCGCTRPFNLAE 593
PG+ R R+GH D +G AGP G+ + + R WR P
Sbjct: 119 PGRIRRLRRPGRLGHEDARGAAGPNMRHGHGRFLRRR-RRRRRRRRWRGVAGGDP----- 172
Query: 594 HINMDSCLPRDPGG 635
N C+PR+ G
Sbjct: 173 --NAIRCMPREGSG 184
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.7 bits (61), Expect = 4.9
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +2
Query: 50 YYLCNKNNEGVDVNNASVTGWGVLDVR-FGEEDCQESV-EIC-----CTNPITEPVPKPQ 208
+YLC+ N G+ + + +LD F +D Q+ V +C CT P++ P
Sbjct: 919 FYLCSHN--GLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYY 976
Query: 209 PDPSKLKGCGYRNPMGSE*PSPEGWVRRLSSASSPG 316
D + +G Y M P P SSASS G
Sbjct: 977 ADLAAYRGRLYYEGMMMSQPPPSS-AASASSASSSG 1011
>02_05_0640 -
30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 268 WSLRPHGVPVAASLQLRGVRL 206
W RPHGV A +LQL+ +RL
Sbjct: 286 WDQRPHGVDQADALQLQTLRL 306
>09_04_0093 - 14550806-14552452
Length = 548
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 331 PAEPQPRGTRRTEPPYPPLR*WSLRPHGVPVAASLQLR 218
P + G RR PP PP +L PH VP + +LQ R
Sbjct: 2 PRDGDGHGRRRPPPPPPPGHPPNLPPH-VPYSRALQQR 38
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 316 PRGTRRTEPPYPPLR*WSLRPHGVP-VAASLQLRGVRLRLWHGF 188
P+GTR T Y P W HG VA ++Q G L L HGF
Sbjct: 412 PKGTRVTSSNYNPFLGW---VHGAQMVAFNMQGYGRALWLMHGF 452
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 EDCQESVEICCTNPITEPVPKPQP-DPSKLKGCGYRNPMGSE*PSP 274
EDC+ CC+ +P PKP+P K K C P E P P
Sbjct: 99 EDCKPKPCHCCS--CEKPKPKPKPCHCEKPKPCHCEKPKPCEKPPP 142
>04_02_0023 +
8655524-8655653,8655742-8656475,8656553-8656918,
8657062-8657183,8657210-8657786
Length = 642
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 515 TRRFQHEKLKNDVALLRMHAPFQPRRAHQHGFLPS 619
T R QH+ + V L R+H F P+ A F PS
Sbjct: 404 TPRAQHDGVAQCVLLARVHPTFAPKIAEGMAFKPS 438
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 331 PAEPQPRGTRRTEPPYPPLR*WSLRPHGVP-VAASLQLRGVRLRLWHGFRYGISAADLHA 155
P P P G ++ PP PP + + RP P V + +L+ H + ++A D H+
Sbjct: 364 PPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTGSADQQAKLKPLHWDKVNVAATD-HS 422
Query: 154 LL 149
++
Sbjct: 423 MV 424
>02_04_0021 + 18975992-18976408
Length = 138
Score = 24.2 bits (50), Expect(2) = 8.4
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 146 CQESVEICCTN-PITEPVPKPQPDP 217
C ++ +C +T P PKP+P P
Sbjct: 82 CNQNSIVCMVRCALTPPPPKPKPTP 106
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 191 PVPKPQPDPSKLKGCG 238
P P P P P K G G
Sbjct: 116 PAPSPSPPPPKAAGHG 131
>12_02_0779 +
23082577-23082903,23083347-23083543,23084346-23084481,
23084558-23084794,23084885-23085108,23085434-23085551,
23086080-23086319,23086423-23086673,23088397-23088484,
23088576-23088727,23089670-23089811
Length = 703
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 316 PRGTRRTEPPYPPLR*WSLRPHGVP-VAASLQLRGVRLRLWHGF 188
P+GTR Y P+ W+ HG VA ++Q LRL GF
Sbjct: 385 PKGTRINSSNYDPMNAWT---HGAQMVAFNMQGHDKALRLMQGF 425
>11_01_0087 - 654461-654912,655878-657186,659080-659187
Length = 622
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 267 GHSDPMGFL*PHPFNFEGSGCGFGTGSVMGLVQQISTLSW 148
GH +P +L P + +GS CG G+ S G + W
Sbjct: 431 GHPNPFYYLSSSPTSSQGSLCGVGSTSSEGFPGPHGKVDW 470
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 397 AHIAYKYAP-GNLRARAGEWDTQTIKEMLDHQVRLVEEKSYTKISTRKAQERRGAPADAR 573
AHI P G + A + W T T + D + EE T IST + ++G R
Sbjct: 191 AHIGLGRLPDGTIDAESSFWRTHTEDQGQDEEEEDEEEFQPTPISTSSQRSQKG----KR 246
Query: 574 ALSTSPST 597
LS++ ST
Sbjct: 247 PLSSNSST 254
>06_03_0417 +
20576716-20576742,20578110-20578345,20578347-20578601,
20578731-20579298
Length = 361
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3
Query: 331 PAEPQPRGTRRTEPPYPPLR*WSLRPHGVPVAASLQLRGVRLRLWHG 191
P P P R P PP S +P A L+ G+R R W G
Sbjct: 19 PKAPAPDDLRHHAVPLPP----SELSQWIPCARELEEAGIRFRPWKG 61
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 225 NFEGSGCGFGTGSVMGLVQQISTLSWQSSSPNLTSS---TPHPVTLALLTSTPSLFL 64
N + S + L+ Q ++ W S+ PN+TSS + T+A+L +T +L L
Sbjct: 366 NLDESQLAISQDGTLVLLNQSRSVVWSSNVPNVTSSNVDSSEAKTVAVLLNTGNLAL 422
>05_04_0057 + 17543016-17543312
Length = 98
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 634 PPGSRGRQESMLMCSARLKGRVHPQERHVVLELFV 530
PPG RG + L+C +R R P H+ L++ V
Sbjct: 53 PPGRRGGRRWWLLCPSRAGRRGKPAMVHLRLQMVV 87
>03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,
5753632-5753820,5753911-5754013,5754087-5754269,
5754392-5754484,5755031-5755219,5756133-5756327
Length = 1306
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 477 AGPPSETRRGKIIHEDFNTKSSRTTW-RSCGCTRPFN 584
AG PSE ++ I++ DF++ + RSC RP N
Sbjct: 994 AGDPSEEQKPDILNSDFDSHWCNLQYGRSCQNPRPMN 1030
>03_01_0528 + 3966687-3967643
Length = 318
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 340 SKRPAEPQPRGTRRTEPPYPPL 275
S P +P PR R PP PPL
Sbjct: 145 SSSPTKPPPRTPTRANPPPPPL 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,365,865
Number of Sequences: 37544
Number of extensions: 638838
Number of successful extensions: 2980
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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