Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30519
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.18
SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.18
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 32 0.53
SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20) 31 0.71
SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2) 31 1.2
SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 3.8
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 29 3.8
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_3018| Best HMM Match : Cathelicidins (HMM E-Value=5.9) 29 5.0
SB_53674| Best HMM Match : rve (HMM E-Value=0.00095) 29 5.0
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.6
SB_52928| Best HMM Match : PKD (HMM E-Value=0) 28 8.7
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 301 GEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAG 447
G +PW L + G G L+HPQ V+T AH Y+ P + + R G
Sbjct: 149 GAWPWQAMLRSNYGGQFCG-GTLVHPQWVITAAHCVYRRGPNDFKIRMG 196
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 289 EAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYA---PGNLRARAGEWD 456
EA+ G+FPW +ALL + Y G G L+H + V+TGAH Y P + GE++
Sbjct: 34 EAKAGQFPWQIALL-FKRQQYCG-GALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEYN 90
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 292 AQFGEFPWVVAL-LDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAGEW 453
A+ GE+PW V++ L++ + + G +I P V+T AH N++ GEW
Sbjct: 552 AEHGEWPWQVSMKLNSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEW 606
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 289 EAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNL 432
EA +PW L A + G G LIHP+ V+T AH P ++
Sbjct: 265 EAPVNGWPWQAMLRSAGGSQFCG-GSLIHPEWVLTAAHCLENTQPSDI 311
>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 173 TNPITEPVPKPQ--PDPSKLKGCGY-RNPMGSE*PSPEGWVRRLSS 301
++P+T P+PKPQ P PSK G G+ RN P W +R S
Sbjct: 215 SHPLTRPIPKPQRPPQPSK-SGSGWARNSTQMRPPQSNVWQQRQQS 259
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 289 EAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNL 432
EA +PW L A + G G LIHP+ V+T AH P ++
Sbjct: 225 EAPVNGWPWQAMLRSAGGSQFCG-GSLIHPEWVLTAAHCLENTQPSDI 271
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 107 GWGVLDVRFGEEDCQESVEICCTNPITEPVPKPQPDPSKLKG 232
GW + DV+F D E + P+ EP P+P P P G
Sbjct: 312 GWTLEDVQFELIDMNEEKPV--DEPVAEPKPEPPPQPDSAPG 351
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 301 GEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAG 447
G++PW L Y G G LIH V+T AH P + R G
Sbjct: 400 GDWPWQAQLRTTTGFPYCG-GSLIHSNWVLTAAHCISSKRPAEVVVRLG 447
>SB_8981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1726
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 140 EDCQ-ESVEICCTNPITEPVPKPQPDPSKLKGCGYRNPMGSE*PSPEGWV 286
+ C+ S +I T P T PV +P PS+ C NP E +P W+
Sbjct: 1173 QSCKPSSSQINATEPSTHPVSQPGSSPSQTSTCSQVNP--PEPRTPPSWI 1220
>SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)
Length = 610
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 381 SRHDWRSHRLQVRPGQFESKSRRMGHPDHQGNAGPPSETRRGKIIH-EDFNTKSSRTTWR 557
S HD H Q +FE + +R Q + P+ +RRG +I E+ T + T +
Sbjct: 102 SEHDKLQHAYQKAVSKFELEQKRARSASPQTSVSTPASSRRGSVIEGEESQTPGTPTVQK 161
Query: 558 S 560
+
Sbjct: 162 T 162
>SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2)
Length = 407
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 339 ERIVRWSRSPDTSSSRHDWRSHR---LQVRPGQFESKSRRMGHPDHQGNAGPPS 491
E + R R +TSS RSH+ L R G+ S+ G+P HQ ++ P S
Sbjct: 195 ETVGRKVRISNTSSEPRTVRSHKHICLAFRTGESPSQPSTTGYPRHQASSTPKS 248
>SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 384 RHDWRSHRLQVRPGQFESKSRRMGHPDHQGNAGPPSETRRGKIIHE 521
RH+W R + R G+ E RR PD+ N G + + KII E
Sbjct: 367 RHEWAESRRKGRTGRVEEDLRRNEVPDYIINHGIVNGSTLVKIIQE 412
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 173 TNPITEPVPKPQPD-PSKLKGCGYRNPMGSE*PSPEGWVRRLSS 301
T P+ +P P P+P PS+ G G +GS+ + +V +L S
Sbjct: 676 TVPVIDPTPAPKPSYPSRPAGSGKAMKLGSKSKDVDSFVDKLRS 719
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 289 EAQFGEFPWVVALLDALNESYAGVGVLIHPQVVMTGAHIAYKYAPGNLRARAGEWDTQTI 468
EA +PW LL + N G LI P V+T AH P + A +T+
Sbjct: 35 EAPINGWPWQAMLLRSPNGDQFCGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTV 94
Query: 469 KEMLDHQV-RLVEEKSY 516
D +V +++ K+Y
Sbjct: 95 GTEKDIKVAQIIPHKNY 111
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 334 RPAEPQPRGTRRTEPP-YPPLR*WSLRPHGVPVAASLQLR 218
RP P PR + T+PP YPP + ++L+ P+ S LR
Sbjct: 104 RPLTPPPRQSNTTQPPAYPPRQSYALQ-QTTPLHTSQPLR 142
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 521 RFQHEKLKNDVALLRMHAPFQPRRAHQHGFLPSPG 625
+F LKND+ALL++H P + LPS G
Sbjct: 112 QFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSG 146
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 29.1 bits (62), Expect = 3.8
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Frame = +2
Query: 434 EQEPENGTPRPSRKCWTTK*DSSRKNHTRRFQHEKLK------NDVALLRMHAPFQPRRA 595
+++PE T RP + K +S K+ R + EK K ND P P A
Sbjct: 836 KEKPEKHTSRPRHDSKSDKKNSDDKHRRHRRRREKKKQRHHSGNDST--GSDIPASPGIA 893
Query: 596 HQHGFLPSPGPGGIAFDTSKKLAVAQTASGER 691
+ PSP I FD + A S ER
Sbjct: 894 NSPASRPSPSRPRINFDAELVMIKANKDSSER 925
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 351 RWSRSPDTSSSRHDWRSHRLQVRPGQFESKSRRMGHPD 464
R+S++PD HDW H Q + S R HPD
Sbjct: 1095 RYSKTPDVGDGFHDWEHHLAQ---DGYMLLSGRCRHPD 1129
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 439 RAGEWDTQTIKEML---DHQVRLVEEKSYTKISTRKAQERRG 555
R GEW + E+L D +VR K+ + ++TR + RRG
Sbjct: 1885 RRGEWPLARVMEVLPSSDGRVRSAMVKTVSTVATRAKRRRRG 1926
>SB_3018| Best HMM Match : Cathelicidins (HMM E-Value=5.9)
Length = 71
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 439 RAGEWDTQTIKEML---DHQVRLVEEKSYTKISTRKAQERRG 555
R GEW + E+L D +VR K+ + ++TR + RRG
Sbjct: 27 RRGEWPLARVMEVLPSSDGRVRSAMVKTVSTVATRAKRRRRG 68
>SB_53674| Best HMM Match : rve (HMM E-Value=0.00095)
Length = 263
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 439 RAGEWDTQTIKEML---DHQVRLVEEKSYTKISTRKAQERRG 555
R GEW + E+L D +VR K+ + ++TR + RRG
Sbjct: 219 RRGEWPLARVMEVLPSSDGRVRSAMVKTVSTVATRAKRRRRG 260
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +1
Query: 445 GEWDTQTIKEMLDHQVRLVEEKSYTKISTRKAQE------RRGAPADARALSTS 588
G+ T +LDH+ + + E +Y K+ +K + GA AD ALS+S
Sbjct: 144 GQAQTDHFYHVLDHENKSIVEPTYAKVDKKKKKSVVSPEVEVGADADDSALSSS 197
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 584 PRRAHQHGFLPSPGPGGIAFDTSKKLAVAQTASGE 688
PRR HG P P GG F K++ V + +GE
Sbjct: 768 PRRK-DHGHSPKPPEGGEMFSKLKRVTVPKKENGE 801
>SB_57607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 361 LLQRTIRSKRPAEPQPRGTRRTEPPYPPLR 272
L+QR++ +R P PR R PP PP R
Sbjct: 298 LMQRSLLQRRGHPPLPRLRLRLTPPPPPSR 327
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 524 FQHEKLKNDVALLRMHAPFQP 586
F LKNDVALL++ P QP
Sbjct: 155 FSMSHLKNDVALLKLDNPIQP 175
>SB_52928| Best HMM Match : PKD (HMM E-Value=0)
Length = 1624
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 466 IKEMLDHQVRLVEEKSYTKISTRKAQERRGAPADARALSTSPSTSTWILAFPGTR 630
+ E++ L E+ + +++ RKA G+ A ++ TS S T ++ FP R
Sbjct: 1442 VAEVVSKSSALDEDPALVELACRKALAGVGSVITAASMDTSTSERTEMVTFPPQR 1496
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 343 RSKRPAEPQPRGTRRTEPPYPPLR*WSLRPHGVPVAASLQLRGVRLRLWHGFRYG 179
R KRPA P PR + + P S+ VP + R + L+LW +R G
Sbjct: 543 RGKRPAPPAPRTSSPVQKP-------SITEKSVPKEDTQGPREITLQLWLFYRIG 590
>SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 430 LRARAGEWDTQTIKEMLDHQVRLVEEKSYTKISTRKAQE 546
LR AG++ +T+K +D +RL E+ + S+ KA +
Sbjct: 960 LRIPAGQYTVETLKRQIDEGLRLGEKSISIEKSSLKAHQ 998
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,494,557
Number of Sequences: 59808
Number of extensions: 658755
Number of successful extensions: 3099
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3089
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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