Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30517
(828 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 110 2e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 60 5e-10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 50 3e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 37 0.003
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 36 0.007
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 33 0.065
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.15
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.46
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 29 1.1
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 1.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 1.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.2
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 5.7
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 26 7.5
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.5
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 9.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 110 bits (265), Expect = 2e-25
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
AAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN AN
Sbjct: 38 AAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTAN 97
Query: 433 VIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGRYFAG 546
V+RYFPTQALNFAFKDK+K++F G R ++FAG
Sbjct: 98 VLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAG 134
Score = 43.2 bits (97), Expect = 5e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLA 629
SGGAAGA SL FVY LD+ARTRLA
Sbjct: 138 SGGAAGAASLLFVYSLDYARTRLA 161
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A S V ++ + L S + ++++ G+VD + + + GL +RG +V+
Sbjct: 144 AASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVV 203
Query: 439 RYFPTQALNFAFKDKYKQVFLGG 507
+ L F D K V L G
Sbjct: 204 GIVVYRGLYFGMYDTLKPVVLVG 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 59.7 bits (138), Expect = 5e-10
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N
Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Query: 436 IRYFPTQALNFAFKDKYKQ 492
+R FP A+ FA + KQ
Sbjct: 84 LRAFPYGAVQFATFNMLKQ 102
Score = 32.3 bits (70), Expect = 0.086
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +1
Query: 250 YLAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 429
+ + +T P + ++ QV + YK I A I K +G+ F+RG +
Sbjct: 235 FTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSS 291
Query: 430 NVIRYFPTQALNF 468
N+++ P ++ +
Sbjct: 292 NMLKIIPVMSITW 304
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 561 GGAAGATSLCFVYPLDFARTRLA 629
G AGA S YPLD ARTRL+
Sbjct: 122 GAIAGAASCATTYPLDIARTRLS 144
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 50.4 bits (115), Expect = 3e-07
Identities = 28/95 (29%), Positives = 49/95 (51%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL ++G+ A + R
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88
Query: 442 YFPTQALNFAFKDKYKQVFLGGVTRRRSSGRYFAG 546
FP + F ++ ++V + + R+ +G
Sbjct: 89 VFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSG 123
Score = 30.7 bits (66), Expect = 0.26
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLAGRMSVKEMASVNFSRSSENCIQQDSFKVPNGSDLVC 737
SG AG S+ F YPL+ R RLA + + ++ + +D F + D +C
Sbjct: 122 SGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTL-------TQVTKDIF---HERDFLC 171
Query: 738 NKRVSGVVRAKGIIHLTGAF 797
NK+ G+ R I + F
Sbjct: 172 NKKYPGLSRLSKICNFYRGF 191
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +1
Query: 271 TAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 450
T V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 451 TQALNFAFKDKYKQ 492
+ A+++ + K+
Sbjct: 408 SVAISYLVYENCKK 421
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGNFANV 435
+V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG +
Sbjct: 240 SVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVLVGI 295
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRR 519
+ FP A + + K+ ++G + R
Sbjct: 296 LGMFPYSATDLGTFEGLKRTWIGILASR 323
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRL 626
+GG AG+ + F+YP+D + R+
Sbjct: 234 AGGMAGSVAQMFIYPVDTLKFRI 256
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 35.9 bits (79), Expect = 0.007
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 274 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 445 FPTQALNFAFKDKYKQVFLGGVTRRRSS 528
P +AL FA D Y +++ R+ SS
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSS 103
Score = 31.5 bits (68), Expect = 0.15
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 277 VAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRHVVW 174
Query: 454 QALNFAFKDKYK 489
A F K +
Sbjct: 175 NAGYFGVIQKIR 186
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 546 VIWPSGGAAGATSLCFVYPLDFARTRL 626
V + +G AG + + +YPLD +TR+
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRM 36
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 32.7 bits (71), Expect = 0.065
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 738 YRPNQTRSEL*KNLAECSFPKTGRNSRWPSPLPTSGRRDGYVRSRGGTRSTERWLRRHHR 559
Y+PN T + A S+ K G+NS+W SP ++ ++ + +S+ R ++
Sbjct: 88 YKPNSTSNPSKHTSAYASYNK-GKNSKWSSPFASTTKKPQESSEKYSKKSSTRKKEHFNK 146
Query: 558 KARLPSE 538
K P +
Sbjct: 147 KPSFPRD 153
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRL 626
+GG AGA + YP +FA+TRL
Sbjct: 23 AGGVAGAIEISITYPAEFAKTRL 45
Score = 30.7 bits (66), Expect = 0.26
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
PI+ VK +Q ++A + YK + +I + GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 463 NFAFKDKYKQV 495
F +K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.46
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 325 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
S I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -1
Query: 675 TGRNSRWPSPLPTSGRRDGYVRSRGGTRSTERWLRRHHRKARLPSEVTP 529
T SR PSPL +S D +RS T + L K P+ TP
Sbjct: 279 TSNASRQPSPLVSSKSTDNIIRSHSPVLLTPQTLSTSETKHIRPNNSTP 327
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWRGNFANV 435
S VAP++ VK Q Q + G + + I +G+ +RG +
Sbjct: 19 SSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMM 78
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRRRSS 528
+ Y P+ ++ F +K K +F GV ++ +S
Sbjct: 79 LGYLPSWSIYFVVYEKCKVLF--GVNKKYTS 107
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 337 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTR 623
+GGAAG S V PLD +TR
Sbjct: 11 AGGAAGLASSLVVAPLDVVKTR 32
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 544 G*SGLPVVPPEPP--LCASCTPSTSHVPVSP 630
G G P+VPP PP + AS +P+ + +P +P
Sbjct: 282 GPGGAPLVPPPPPGMVMASPSPAAATIPGAP 312
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 550 SGLPVVPPEPPLCASCTPSTSHVPVSP 630
+G+P PP PP + P+ + P +P
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 YEITPNLLFKNQELVFRDPPSACAATPTSTY 165
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 7.5
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLAGRMSVKEMASVNFSRSSENCIQQDSFKVPNGSDLVC 737
+G AGA + PLD A+TRL + + S + + + ++ K + + LV
Sbjct: 220 TGSLAGAGAGFLTTPLDVAKTRLQTMIRTTDKVSDDINSGRYFFAKDENSKSKSAASLVK 279
Query: 738 NK-----RVSGVVRAKGIIHLTGAFKTFRFLTEN 824
K + G+ +++G++ L F F T +
Sbjct: 280 PKIGIRHVLGGLYKSEGLLGLFRGFGPRIFWTSS 313
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 377 TKASTIPL*RWSAAICLLTCCTWSSSLTRSIGATAV 270
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 361 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,594,034
Number of Sequences: 5004
Number of extensions: 79501
Number of successful extensions: 285
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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