Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30517
(828 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 53 2e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 5e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 6e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.013
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.023
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.030
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.040
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.053
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.093
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.093
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.28
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.65
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.65
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 31 1.1
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.5
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.5
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 30 2.0
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 30 2.6
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.6
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 30 2.6
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.5
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 6.1
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 6.1
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 8.0
SB_40320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 101 bits (243), Expect = 5e-22
Identities = 50/82 (60%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 433 VIRYFPTQALNFAFKDKYKQVF 498
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLAGRMSV 644
SGGAAGA SL FVY LD+ RTRLA V
Sbjct: 119 SGGAAGAMSLFFVYSLDYCRTRLANDAKV 147
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 439 RYFPTQALNFAFKDKYKQ 492
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 253 LAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
LA VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN AN
Sbjct: 146 LAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGAN 199
Query: 433 VIRYFPTQALNFAFKDKYKQV 495
VI+ P + F +K K++
Sbjct: 200 VIKIAPESGIKFFAYEKAKKL 220
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/79 (25%), Positives = 43/79 (54%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 445 FPTQALNFAFKDKYKQVFL 501
P ++ A + K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 417
A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN +
Sbjct: 69 AVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVSC 121
Query: 436 IRYFPTQALNFA 471
IR FP A+ +A
Sbjct: 122 IRLFPYSAVQYA 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 442 YFP 450
FP
Sbjct: 222 LFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 439 RYFPTQALNFAFKDKYKQVF 498
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 277 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 456
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 457 ALNF 468
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 492
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 334 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 498
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 352 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 36.7 bits (81), Expect = 0.023
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 274 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A P++ K +Q + I YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 454 QALNFAFKDKYKQV---FLGGVT 513
L F F ++ + F GG +
Sbjct: 167 TVLTFIFLEQLNRAANYFYGGTS 189
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 361 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLA 629
+G AG T+ YPLD R+RLA
Sbjct: 70 AGSLAGMTACACTYPLDMVRSRLA 93
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 561 GGAAGATSLCFVYPLDFARTRL 626
GG AGA S YPLD R R+
Sbjct: 179 GGVAGAVSQTIAYPLDVVRRRM 200
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.040
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 280 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.053
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 364 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 489
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.1 bits (77), Expect = 0.070
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
+SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.093
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 463 NFAFKDKYKQV 495
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGLLS 408
A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+ +
Sbjct: 25 ASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKT 84
Query: 409 FWRGNFANVIRYFPTQALNFAFKDKYKQVF 498
++G + R ++ D+ K ++
Sbjct: 85 MYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +1
Query: 238 PGWRYLAAVSKTAVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 402
P WR+++ + VA P++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 403 LSFWRGNFANVIRYFP 450
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGR 534
+P+E +L W G ++VI F A+N F+D+YK++ + R R SG+
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSGQ 185
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 459
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 32.7 bits (71), Expect = 0.37
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 368
RT+ R + R R + V+RRR DRR T A T R+Q DRRR Q R
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQVTSR 168
Query: 369 R 371
R
Sbjct: 169 R 169
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 368
RT+ R + R R + V+ RR DRR T A T R+Q DRRR + RR
Sbjct: 100 RTRARVTIRRQVDRRRTRARVTSRRQVDRRRTR------AQVTRRRQVDRRRTRARVTRR 153
Query: 369 R 371
R
Sbjct: 154 R 154
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRAC---------QAAAPSTARQQADRR 341
RT+ R + R R + V+ RR DRR T + A T+R+Q DRR
Sbjct: 70 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTRARVTIRRQVDRRRTRARVTSRRQVDRR 129
Query: 342 RPALQGYRRR 371
R Q RRR
Sbjct: 130 RTRAQVTRRR 139
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRR 344
RT+ R + R R + V+ RR DRR T A T+R+Q DRRR
Sbjct: 55 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRR 100
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/94 (23%), Positives = 33/94 (35%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
+ P + VK+ Q + + I YK + AF +I K++G L W G V R
Sbjct: 127 IGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTGMKPTVKR 182
Query: 442 YFPTQALNFAFKDKYKQVFLGGVTRRRSSGRYFA 543
D K + L R + A
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREGVALHLA 216
Score = 28.7 bits (61), Expect = 6.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 142 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRYLAAVSKTAVAPIERVKLLLQV 315
AA + T P+ DH + N E R G V L V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 316 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 463 NF 468
F
Sbjct: 99 TF 100
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
+ AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 445 FP 450
P
Sbjct: 276 AP 277
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 253 LAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 429
+A V+ + V P++RVK +LQ++ + Y G VD RI +E G+ ++G
Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201
Query: 430 NVIRYFP 450
+R P
Sbjct: 202 TAMRDIP 208
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 463 NFA 471
F+
Sbjct: 117 LFS 119
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 678 KTGRNSRWPSPLPTSGRRDGYVRSRGGTRSTERWLRRHHRKARLPSEVTPRTASS 514
+TG +R P P PTS R +RGG ++T++ R R+ ++ + A++
Sbjct: 352 RTGSRTRTP-PTPTSSRASSRGSARGGAKTTKKCTTRKSREQNGDTKTKTKCATT 405
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 558 SGGAAGATSLCFVYPLDFARTRLA 629
+GG AG T+ YPLD R+RLA
Sbjct: 4 AGGLAGLTACSCTYPLDIVRSRLA 27
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 423
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 277 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 450
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSS 528
+P+E L + G ++VI F A+N F+++YK+VF R R+S
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNS 311
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGRY 537
+P+E +L + G ++VI F A+N FK++YK++ T R G +
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEGEH 318
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 358 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 539 DLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 274 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 454 QALNFAFKDKYKQVF--LGG 507
Q L+F + ++ LGG
Sbjct: 66 QTLHFTVYEYARKALNPLGG 85
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1266 DLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 252 SRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGSP 404
S+ + QD++ST++ QA +P ++QQA R+ Q ++ P +P
Sbjct: 124 SKPQDQDKQSTDQDKQATSPKISKQQAPRQASNKQQDKQATSPKTSKQQAP 174
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 385 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_40320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 675 TGRNSRWPSPLPTSGRRDGYVRSRGGTRSTERWLRRHHRKARLPS-EVTPRT 523
T ++ R P PTS R +RGG ++T+ + RK+R + + T +T
Sbjct: 25 TQKSCRKSHPYPTSSRASSRSSARGGAKTTKTTKKCTTRKSRTQNGDTTTKT 76
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 658 LAISFTDIRPARRVRAKSRGYTKHREVAPAAPPEGQITQRSNAQNCVFL 512
L S + P+ + ++ T +E P +PP + S QNCV+L
Sbjct: 36 LTTSPQGVEPSPPLNTQASVPTSSKEQPPPSPPPAGLCCMSGCQNCVWL 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,684,108
Number of Sequences: 59808
Number of extensions: 683672
Number of successful extensions: 2407
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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