Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30517
(828 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 168 6e-44
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 168 6e-44
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 23 3.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 3.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.6
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 23 4.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 22 6.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 8.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 168 bits (408), Expect = 6e-44
Identities = 77/97 (79%), Positives = 85/97 (87%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGRYFAG 546
IRYFPTQALNFAFKDKYKQVFLGGV + RYF G
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVG 117
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +3
Query: 510 DKKTQFWALLRWVIW--PSGGAAGATSLCFVYPLDFARTRLA 629
DK TQF LR+ + SGGAAGATSLCFVYPLDFARTRLA
Sbjct: 106 DKNTQF---LRYFVGNLASGGAAGATSLCFVYPLDFARTRLA 144
Score = 39.5 bits (88), Expect = 4e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 197 MSNLADPVAFAKDFLAGGI 253
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 8.0
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 439 RYFPTQALNFAFKD 480
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 635 DVGKGDGQREF 667
DVGK G+REF
Sbjct: 146 DVGKAGGEREF 156
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 168 bits (408), Expect = 6e-44
Identities = 77/97 (79%), Positives = 85/97 (87%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGRYFAG 546
IRYFPTQALNFAFKDKYKQVFLGGV + RYF G
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVG 117
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/42 (73%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +3
Query: 510 DKKTQFWALLRWVIW--PSGGAAGATSLCFVYPLDFARTRLA 629
DK TQF LR+ + SGGAAGATSLCFVYPLDFARTRLA
Sbjct: 106 DKNTQF---LRYFVGNLASGGAAGATSLCFVYPLDFARTRLA 144
Score = 39.5 bits (88), Expect = 4e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 197 MSNLADPVAFAKDFLAGGI 253
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 8.0
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 439 RYFPTQALNFAFKD 480
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 635 DVGKGDGQREF 667
DVGK G+REF
Sbjct: 146 DVGKAGGEREF 156
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 23.0 bits (47), Expect = 3.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 588 TERWLRRHHRKARLPSEVTPRTASS 514
T R R H+ K P E PRTA S
Sbjct: 4 TRRVKRSHNGKNGSPEEKRPRTAFS 28
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.0 bits (47), Expect = 3.4
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +3
Query: 636 MSVKEMASVNFSRSSENCIQQDSFKVPNGSDLVCNKRVSGVVRAKGIIHLTGAFKTFRFL 815
+S +S N ++C+ +V K+ SG + + I+H T F+T++
Sbjct: 94 LSSDSASSGNVYCKCDDCLLGIVDDYQRNPSVVGRKKSSGWRKLRNIVHWTPFFQTYKKQ 153
Query: 816 TENW 827
W
Sbjct: 154 RYPW 157
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 556 LPVVPPEPPLCASCTPSTSHVPVSP 630
+P +PPE CA+ T + V P
Sbjct: 1110 VPSIPPEDVRCAALTSQSLQVSWQP 1134
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 556 LPVVPPEPPLCASCTPSTSHVPVSP 630
+P +PPE CA+ T + V P
Sbjct: 1106 VPSIPPEDVRCAALTSQSLQVSWQP 1130
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -2
Query: 575 SGGTTGRPDYPAK*RPELRLLVTPPRNTCLYLSLKAKLSAWVG 447
SGGTT P + + E+ L + + K S W+G
Sbjct: 75 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIG 117
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 773 TFGTDNTRNPFV 738
+FGTD NPF+
Sbjct: 87 SFGTDKLNNPFI 98
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 764 CQRYHPSNRGLQN 802
C RYH N G QN
Sbjct: 419 CGRYHNQNAGNQN 431
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,256
Number of Sequences: 438
Number of extensions: 5963
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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