Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30516
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.21 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.28 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.6  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 625  SGSAQWPGPLAGIRTRSDKLPPFNGAG-PSN 536
            S SA W G L GI    D LPP N  G P N
Sbjct: 1803 STSAGWDGVLDGIINEEDCLPPDNDKGYPGN 1833


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 24/70 (34%), Positives = 30/70 (42%)
 Frame = -2

Query: 756 RPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGPDRLPEYELG 577
           R  E+   R   +     PR PF  IP    G P GL++   L   P  GP  LP +   
Sbjct: 529 RERERERERMMHMMPHSLPR-PFFSIP----GLPPGLSAPLGLGMRPQGGPLGLPSHHPL 583

Query: 576 RTNCHLSMGL 547
             +  LSMGL
Sbjct: 584 HPSLGLSMGL 593


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 578 PSSYSGKRSGPLGGPRASA*PLVSPQGGPMGSQGIP-RKGVLGAP 709
           P  Y G + GP G            Q GP G QG+P R G  G P
Sbjct: 418 PRGYEGPQ-GPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGMP 461


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 679  SLGTHGPPLRANKRLSTGSGSAQWPGPLAGIRTRSDKLPPFNGAG 545
            S+ +H P L +    S G  SA  PG  AG+  +    PP    G
Sbjct: 1355 SIISHTPSLSSASG-SIGPKSADQPGAAAGLHHQQPSSPPTQTIG 1398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,389
Number of Sequences: 2352
Number of extensions: 20454
Number of successful extensions: 80
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)