Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30516
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 54 1e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 7e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.002
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.002
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 0.002
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.002
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 40 0.003
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 40 0.003
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 38 0.006
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.019
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 36 0.032
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.032
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 36 0.032
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.075
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 35 0.075
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 35 0.075
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 35 0.075
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 34 0.099
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 34 0.099
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 34 0.099
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 34 0.099
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.099
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.099
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.099
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 33 0.17
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.17
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.17
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.17
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.17
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.17
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 33 0.23
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 33 0.23
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 33 0.23
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 33 0.23
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 32 0.40
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.40
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.40
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.40
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.53
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.53
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.53
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 31 0.70
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.70
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.70
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 0.70
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 0.70
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.70
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.70
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 31 0.70
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.92
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 0.92
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 0.92
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 31 0.92
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 31 0.92
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 30 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.6
Z83236-7|CAB05782.2| 257|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 30 2.1
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 2.1
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 2.1
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 2.1
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 2.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 2.8
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 29 3.7
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 3.7
AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical... 29 3.7
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 3.7
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 29 4.9
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 29 4.9
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 4.9
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 29 4.9
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 8.6
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 28 8.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.6
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 8.6
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +1
Query: 361 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 486
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENN 257
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEED 46
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +1
Query: 361 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 486
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENN 257
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEED 46
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENNKSA 266
+++GN+S +TT+ADLR LF YG + E I + Y FV E + A
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECA 285
Score = 35.9 bits (79), Expect = 0.032
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +3
Query: 126 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENNKSAAN 272
F +F+G+LS + L+ F K+G V E ++R+ YGFV N ++A N
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAEN 191
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 361 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 486
T ++VGN++ +T ++R+LF +G + E I + Y FV +
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYE 280
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 322 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGRCE 504
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD E
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENNKSAANHSES 284
++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + E+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEA 169
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGRCE 504
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD E
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAE 164
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENNKSAANHSES 284
++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + E+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEA 169
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENNKSAANHS 278
++F+GNL ++ E +L+ LF +G + EC + GF + +AAN S
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLISNAANKS 165
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 340 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 483
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 268 RTIQNLNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 444
R + +N E++HG+ ++I + + A IF+ NL V + F FG ++
Sbjct: 113 RALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 445 ECDIV-------RNYGFVHLD 486
C + + YGFVH +
Sbjct: 173 SCKVATDDEGNSKGYGFVHFE 193
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENNKSA 266
IFI NL + F +G ++ C + + YGFVH E SA
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSA 198
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 268 RTIQNLNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 444
R + +N E++HG+ ++I + + A IF+ NL V + F FG ++
Sbjct: 113 RALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 445 ECDIV-------RNYGFVHLD 486
C + + YGFVH +
Sbjct: 173 SCKVATDDEGNSKGYGFVHFE 193
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENNKSA 266
IFI NL + F +G ++ C + + YGFVH E SA
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSA 198
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +1
Query: 331 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDAT 492
K+R+ S +I+V N+ R ++ +F +G V+ +IV N +GFV LD+
Sbjct: 41 KTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSI 100
Query: 493 GRCER 507
CE+
Sbjct: 101 ESCEK 105
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +1
Query: 322 EAAKSRKAPSTPTT-KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGF 474
E ++R P T +FVG+L + + ++RE F KFG V E I+R+ YGF
Sbjct: 118 EPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 475 VHLDATGRCERPFKE 519
V ER E
Sbjct: 178 VSYPRREDAERAIDE 192
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 120 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
R F +F+G+L + LR F K+G V E I+R+
Sbjct: 130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRD 166
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +1
Query: 331 KSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YGFVHLDAT 492
K+R+ S +I+V N+ R ++ +F +G V+ +IV N +GFV LD+
Sbjct: 41 KTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSI 100
Query: 493 GRCER 507
CE+
Sbjct: 101 ESCEK 105
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENNKSA 266
+I+IG L+ + +E D+ F YG + + + +GFV ++ + A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 486
+I++G LT + ++ F+ +G + + + +GFV D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFD 44
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENNKSA 266
+I+IG L+ + +E D+ F YG + + + +GFV ++ + A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 486
+I++G LT + ++ F+ +G + + + +GFV D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFD 44
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENNKSA 266
+I+IG L+ + +E D+ F YG + + + +GFV ++ + A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 486
+I++G LT + ++ F+ +G + + + +GFV D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFD 44
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.5 bits (78), Expect = 0.043
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 250 KTTSRPRTIQNLNGELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELF 423
+T S P T + G H Q + A+ + P + T +FV NL+ T + +LF
Sbjct: 335 QTASPPATNGQVAGLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLF 394
Query: 424 QKFGTVVECDIVRN 465
+FG +V I+R+
Sbjct: 395 SQFGAIVNVKILRD 408
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENNKS 263
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N KS
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Frame = +1
Query: 355 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGRCERP 510
P +FV L T ++ +F +FG + C+IVR+ Y F+ D CE+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 511 F 513
F
Sbjct: 299 F 299
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENNKS 263
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N KS
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 294
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Frame = +1
Query: 355 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGRCERP 510
P +FV L T ++ +F +FG + C+IVR+ Y F+ D CE+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 511 F 513
F
Sbjct: 299 F 299
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENNKS 263
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N KS
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKS 225
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Frame = +1
Query: 355 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGRCERP 510
P +FV L T ++ +F +FG + C+IVR+ Y F+ D CE+
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 511 F 513
F
Sbjct: 230 F 230
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 144 NLSDKTTEADLRPLFEKYGTVVECDIV 224
NLS TTE DLR +F ++G + +CD+V
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLV 108
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 8/52 (15%)
Frame = +1
Query: 355 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLD 486
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ +
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +3
Query: 120 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENNKSA 266
+T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++ A
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 34.7 bits (76), Expect = 0.075
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 96 PII*NAGHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHME 251
P++ + KIF+G L T++ L FE++G + E ++ R YGFV M+
Sbjct: 25 PVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
Query: 252 NNKSA 266
+ SA
Sbjct: 85 DRASA 89
Score = 34.7 bits (76), Expect = 0.075
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +1
Query: 352 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGRCER 507
T TKIFVG L T + E F++FG + E ++ R YGFV + ER
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 508 PFKE 519
K+
Sbjct: 92 ACKD 95
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Frame = +3
Query: 120 RTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENNKSA 266
+T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++ A
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.099
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Frame = +1
Query: 325 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 471
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 472 FVHLDATGRCERPFKEFERYDGSTDQPH*KVAV-CPTEFVFRQAVRAIG 615
FV ++ ER +E GS + K+ V C T V + V+ G
Sbjct: 196 FVTMERPQDAERARQELH---GSMIEGR-KIEVNCATARVHSKKVKPTG 240
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENNKSA 266
++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME + A
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.099
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Frame = +1
Query: 325 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 471
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 472 FVHLDATGRCERPFKEFERYDGSTDQPH*KVAV-CPTEFVFRQAVRAIG 615
FV ++ ER +E GS + K+ V C T V + V+ G
Sbjct: 196 FVTMERPQDAERARQELH---GSMIEGR-KIEVNCATARVHSKKVKPTG 240
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENNKSA 266
++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME + A
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +1
Query: 274 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 432
IQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF KF
Sbjct: 114 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 173
Query: 433 GTVVECDIV 459
G + C+++
Sbjct: 174 GNITSCEVM 182
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 268 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 444
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 25 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 84
Query: 445 ECDIV-------RNYGFVHLD 486
C + + YGFVH +
Sbjct: 85 SCKVAIDEDGFSKGYGFVHFE 105
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENNKSAAN 272
IFI NL + F +G ++ C + + YGFVH E ++A N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQN 112
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENNKSA 266
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 202
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +1
Query: 274 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 432
IQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF KF
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 236
Query: 433 GTVVECDIV 459
G + C+++
Sbjct: 237 GNITSCEVM 245
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 268 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 444
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 445 ECDIV-------RNYGFVHLD 486
C + + YGFVH +
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFE 168
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENNKSAAN 272
IFI NL + F +G ++ C + + YGFVH E ++A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQN 175
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENNKSA 266
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 126 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 227
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 126 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 227
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.3 bits (75), Expect = 0.099
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 126 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 227
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 268 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 444
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 445 ECDIV-------RNYGFVHLD 486
C + + YGFVH +
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFE 168
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +1
Query: 274 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 432
IQ +NG L+ G+ + + A ++R+ T T ++V N D + ++F KF
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKF 236
Query: 433 GTVVECDIV 459
G + C+++
Sbjct: 237 GNITSCEVM 245
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENNKSAAN 272
IFI NL + F +G ++ C + + YGFVH E ++A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQN 175
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENNKSA 266
+++ N D + L +F K+G + C+++ + +GFV N + A
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 114 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENNKSA 266
G K+++GNL E ++ +F KYG + DI G FV E+++ A
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDA 59
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 471
K++VGNL R EV ++F K+G + DI G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRG 45
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 114 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENNKSA 266
G K+++GNL E ++ +F KYG + DI G FV E+++ A
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDA 59
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG 471
K++VGNL R EV ++F K+G + DI G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRG 45
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 245
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 245
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 245
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 123 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 224
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +3
Query: 123 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENNKSAAN 272
T ++ + NL TE LR FEKYG + + + R + FV + SA+N
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASN 58
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + E DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 307 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 462
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENNKSA 266
+IF+G TTE +LR FEK+ V + +V++ YGF+ E A
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGRCE 504
+IFVG T E+RE F+KF V + +V++ YGF+ + + E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAE 120
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
K+F+G + E DLR LFE++G + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +1
Query: 307 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 462
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENNKSA 266
+IF+G TTE +LR FEK+ V + +V++ YGF+ E A
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGRCE 504
+IFVG T E+RE F+KF V + +V++ YGF+ + + E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAE 121
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 227
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.40
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENNKSA 266
+++IG L ++ ++ D+ F YG + + + +GFV ++ + A
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDA 48
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Frame = +3
Query: 117 HRTFK----IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
H+T+K I+IG LS +E D+ +F +YG V+ +++R+
Sbjct: 31 HQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRD 72
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 123 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 221
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 358 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 456
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 123 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 221
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 358 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 456
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 123 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 221
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 358 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 456
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
KIFVG LT T +RE + +FG + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
KIFVG LT T +RE + +FG + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 465
KIFVG LT T +RE + +FG + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 650 PQGGPMGSQGIPRKGVLGAPEPPTVFRRFEAFSGGRFPILT 772
P GP GS+ + ++ P T FRR E S R P ++
Sbjct: 504 PAAGPTGSEAEQKAMMMAQQRPTTTFRRSEVSSSARAPTVS 544
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 650 PQGGPMGSQGIPRKGVLGAPEPPTVFRRFEAFSGGRFPILT 772
P GP GS+ + ++ P T FRR E S R P ++
Sbjct: 565 PAAGPTGSEAEQKAMMMAQQRPTTTFRRSEVSSSARAPTVS 605
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 650 PQGGPMGSQGIPRKGVLGAPEPPTVFRRFEAFSGGRFPILT 772
P GP GS+ + ++ P T FRR E S R P ++
Sbjct: 529 PAAGPTGSEAEQKAMMMAQQRPTTTFRRSEVSSSARAPTVS 569
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 349 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 486
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 124 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 170
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 349 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 486
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 134 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 180
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 349 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 486
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 237 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 283
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 349 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 486
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 205 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 251
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/52 (19%), Positives = 29/52 (55%)
Frame = +1
Query: 367 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGRCERPFKEF 522
+++ N+ + ++ ELF+++ ++ V++Y F+H + C + +E+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEW 430
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENNKSA 266
K+F+G L +E DLR FE++G V + + RN+ F+ E +SA
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 292 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 441
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 114 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 221
G+ KIF+G +S + DL F +YG V + +
Sbjct: 25 GNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENNKSA 266
K+F+G L +E DLR FE++G V + + RN+ F+ E +SA
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 292 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 441
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 114 GHRTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 221
G+ KIF+G +S + DL F +YG V + +
Sbjct: 25 GNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.70
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 41 LVFIFLTCVIYCYSLYIVTHNLKCRAPY 124
L+F F++C ++ Y++Y+V H + + Y
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELKIRY 131
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P +G A +GPP P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P +G A +GPP P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 138 IGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
I NLS +TT DLR FE+YG + + I R+
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 138 IGNLSDKTTEADLRPLFEKYGTVVECDIVRN 230
I NLS +TT DLR FE+YG + + I R+
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P +G A +GPP P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P +G A +GPP P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Frame = +1
Query: 304 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR------- 462
GQ + + +K S+P +FVGN++DK +R++ + G V ++
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 463 NYGFVH---LDATGRCERPFKEFERYDGS-TDQPH*KV 564
+GF H L+ T R R EF D T +P KV
Sbjct: 88 GFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKV 125
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Frame = +1
Query: 304 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR------- 462
GQ + + +K S+P +FVGN++DK +R++ + G V ++
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 463 NYGFVH---LDATGRCERPFKEFERYDGS-TDQPH*KV 564
+GF H L+ T R R EF D T +P KV
Sbjct: 88 GFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKV 125
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 274 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 447
I+ LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 71 IKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 274 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 447
I+ LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 81 IKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENNKSA 266
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 205
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 361 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV 459
T ++V N D + +LF KFG + C+++
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM 185
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 575 RPSSYSGKRSGPLGGPRASA*PLVSPQGGPMGSQGIPRKGVLGAPEPPT 721
R G R GP GGPR S+ + P G + P G PPT
Sbjct: 375 REGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT 423
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 575 RPSSYSGKRSGPLGGPRASA*PLVSPQGGPMGSQGIPRKGVLGAPEPPT 721
R G R GP GGPR S+ + P G + P G PPT
Sbjct: 396 REGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT 444
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = +2
Query: 575 RPSSYSGKRSGPLGGPRASA*PLVSPQGGPMGSQGIPRKGVLGAPEPPT 721
R G R GP GGPR S+ + P G + P G PPT
Sbjct: 381 REGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT 429
>Z83236-7|CAB05782.2| 257|Caenorhabditis elegans Hypothetical
protein K10H10.9 protein.
Length = 257
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 665 MGSQGIPRKGVLGAPEPPTVFRRFEA 742
+GSQG P + GAP P +F +F+A
Sbjct: 24 IGSQGFPLRKFTGAPPPLHIFYKFQA 49
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 129 KIFIGNLSDKTTEADLRPLFEKYGTV 206
K+F+ N+ + T+ +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENNKSA 266
IF+ NL TTE ++R E ++ D+V R + +V MEN++ A
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKA 645
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 361 TKIFVGNLTDKTRAPEVRELFQKFGTV 441
+K+FV N+ + E++ LF KFGTV
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTV 709
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 367 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 474
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 367 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 474
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 367 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 474
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 367 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 474
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/83 (28%), Positives = 36/83 (43%)
Frame = +1
Query: 160 PQKPILDRYSKNTVRS*NAISSEITVSCTWKTTSRPRTIQNLNGELVHGQAIKIEAAKSR 339
P I+ S + R SS T S T TS+ T+ + G + IE+ +S
Sbjct: 695 PDSTIITSTSSTSTRP--GTSSTATDSPTMDDTSKTSTVTS------EGTTLSIESTESS 746
Query: 340 KAPSTPTTKIFVGNLTDKTRAPE 408
+PS TT F+G + +R E
Sbjct: 747 ASPSDFTTPDFIGFTSSVSRTSE 769
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -1
Query: 706 GPKDAFSGNSLGTHGPPLRANKRLSTGSGSAQWPGPLAGIRTRSDKLPPFNGAGPS 539
GP + N G +GP + STG G + PGP + L P G PS
Sbjct: 1368 GPNGSSDPNKPGPNGPSNPSVPESSTGGGPS--PGPSPNEPSNPSILGPSTGGDPS 1421
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENNKSA 266
+F+GN+S +E +R +F K G V+ +V + YGF+ + ++A
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +3
Query: 126 FKIFIGNLSDKTTEADLRPLFEKYGTV----VECD--IVRNYGFVHMENNKSAA 269
F +++GN +TTE DL F + G V + CD R GF +E + AA
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAA 57
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S + G GAP P + P EP+ P G +GPP P
Sbjct: 184 GNKGP---SGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQGPPGQP 233
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 LVHGQAIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF 423
++ G+ ++ R P+ ++IFVG LTDK ++R++F
Sbjct: 236 MIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVF 279
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYG-----TVVECDIVRNYGFVHMENNKSAANHS 278
+F+G ++ +T+E+ LR FE YG T+V + + G+ +E + A H+
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHT 159
>AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical
protein Y105E8A.25 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 670 THGPPLRANKRLSTGSGSAQWPGPLAGIRTRSDKLPPFNGAGPS 539
T PP+R +R+S S +++ A ++ DK+PPF G S
Sbjct: 367 TEPPPVRLPRRVSAVSSTSRSSPQRATDQSWKDKMPPFGIVGHS 410
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = -2
Query: 759 NRPPEKASNRRKTVGGSGAPRTPFRGI-PWEPMGPPCGLTS-G*ALARGPPNGPDRLPEY 586
++PP + R+T AP P R I P +P A R PP GP P Y
Sbjct: 400 SKPPAPSPTSRETDSIPEAPAEPIRNISPPQPRWTRSQSRGRSEATRRSPPKGPSAPPAY 459
Query: 585 EL---GRTNCHLSMGL 547
L G T H M L
Sbjct: 460 TLPFGGSTPNHEPMDL 475
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLD 486
K++VG L + E+ E+F +FG + + + R + FV D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYD 47
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLD 486
K++VG L + E+ E+F +FG + + + R + FV D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYD 47
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 364 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLD 486
K++VG L + E+ E+F +FG + + + R + FV D
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYD 47
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 415 ELFQKFGT----VVECDIVRNYGFVHLDATGRCERPFKEFE 525
EL+Q FG VV+C + YGFV D ++ E +
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMD 151
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P G +GPP P
Sbjct: 151 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPGPQGPPGQP 200
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/53 (33%), Positives = 22/53 (41%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P G +GPP P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGTPGPQGPPGQP 233
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 546 PAPLKGGSLSDRVRIPASGPGHW---ADPEPVLNRLLARRGGPWVPKEFPEKAS 698
P P + S++ P+SG A+ P N++ ARRGGP + + ++ S
Sbjct: 86 PEPTQNSSMASMSSTPSSGQSSSPRNAELSPQRNQMEARRGGPHLSVQSQQRHS 139
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -2
Query: 762 GNRPPEKASNRRKTVGGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGP 604
GN+ P S G GAP P + P EP+ P +G A +G P P
Sbjct: 184 GNKGP---SGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGQPGAP 233
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 319 IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 441
++ + +R + + +FVGN+ VR +F FGT+
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +3
Query: 546 PAPLKGGSLSDRVRIPASGPGHW---ADPEPVLNRLLARRGGPWVPKEFPEKAS 698
P P + S++ P+SG A+ P N++ ARRGGP + + ++ S
Sbjct: 86 PEPTQNSSMASMSSTPSSGQSSSPRNAELSPQRNQMEARRGGPHLSVQSQQRHS 139
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 132 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFV 242
+F+ N+ ++ TE D+ F +YG + + ++ R GF+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFL 95
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = -2
Query: 717 GGSGAPRTPFRGIPWEPMGPPCGLTSG*ALARGPPNGPDRLPEYELGRTNCH 562
GGSGAP P GPP G G GPP GP + P + N H
Sbjct: 441 GGSGAP----------PPGPP-GAYPGNGAPGGPPGGPPQFPGHPGMDPNYH 481
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 10 VYCVGNSWSLFGVHIFNLCYILLFFV 87
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,057,725
Number of Sequences: 27780
Number of extensions: 465509
Number of successful extensions: 1832
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1821
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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