Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30515
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 147 7e-36
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 147 7e-36
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 133 2e-31
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 133 2e-31
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 83 3e-16
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 72 6e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 72 6e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 4e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 60 1e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 57 2e-08
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 57 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 56 2e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 54 2e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 52 7e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 48 8e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 1e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 2e-05
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 45 6e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 45 6e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 45 6e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 45 6e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 45 6e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 45 8e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.009
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.009
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 37 0.020
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.081
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.43
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.75
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 31 1.00
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 30 2.3
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 29 3.0
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 5.3
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.3
Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical p... 28 9.3
Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical p... 28 9.3
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 28 9.3
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 9.3
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 147 bits (357), Expect = 7e-36
Identities = 77/133 (57%), Positives = 98/133 (73%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 430 DHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMK 609
D++N +CHACIGGTN+ EDIR+L+ G +V G + R + + L +
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRT--RAIKLLVLDE 176
Query: 610 ADEMLSRGFKGQI 648
ADEML++GFK Q+
Sbjct: 177 ADEMLNKGFKEQL 189
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 147 bits (357), Expect = 7e-36
Identities = 77/133 (57%), Positives = 98/133 (73%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 430 DHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMK 609
D++N +CHACIGGTN+ EDIR+L+ G +V G + R + + L +
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRT--RAIKLLVLDE 176
Query: 610 ADEMLSRGFKGQI 648
ADEML++GFK Q+
Sbjct: 177 ADEMLNKGFKEQL 189
Score = 62.1 bits (144), Expect = 5e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 133 bits (321), Expect = 2e-31
Identities = 75/129 (58%), Positives = 92/129 (71%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 442 AKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKADEM 621
CIGGT+VR+D R+LE G+ +VVG + + R + F L +ADEM
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVG-TPGRVGDMINRNALDTSRIKMF-VLDEADEM 183
Query: 622 LSRGFKGQI 648
LSRGFK QI
Sbjct: 184 LSRGFKDQI 192
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 133 bits (321), Expect = 2e-31
Identities = 75/129 (58%), Positives = 92/129 (71%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 442 AKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKADEM 621
CIGGT+VR+D R+LE G+ +VVG + + R + F L +ADEM
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVG-TPGRVGDMINRNALDTSRIKMF-VLDEADEM 183
Query: 622 LSRGFKGQI 648
LSRGFK QI
Sbjct: 184 LSRGFKDQI 192
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/129 (31%), Positives = 76/129 (58%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H
Sbjct: 78 LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 436 LNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKAD 615
+ K GGT++R+DI +L V LV+ + + + + L +AD
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDL--MEKGVAKMEHCKTLVLDEAD 195
Query: 616 EMLSRGFKG 642
++LS+ F+G
Sbjct: 196 KLLSQDFQG 204
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 71.7 bits (168), Expect = 6e-13
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 436 LNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRP--CASCQQPSNFWFLMK 609
+ KC +GG ++ R+L +VV + + P A + F+ L +
Sbjct: 184 ITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDE 243
Query: 610 ADEMLSRGFKGQI 648
AD ML + Q+
Sbjct: 244 ADRMLEGQYNDQL 256
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 71.7 bits (168), Expect = 6e-13
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 436 LNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRP--CASCQQPSNFWFLMK 609
+ KC +GG ++ R+L +VV + + P A + F+ L +
Sbjct: 184 ITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDE 243
Query: 610 ADEMLSRGFKGQI 648
AD ML + Q+
Sbjct: 244 ADRMLEGQYNDQL 256
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 310 KIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 335 KIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 420
+ GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWF 600
L K GG + R LE GV +VV + + + ++
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDF--LDNGTTNMKKCSYLV 281
Query: 601 LMKADEMLSRGFKGQI 648
L +AD ML GF+ QI
Sbjct: 282 LDEADRMLDMGFEPQI 297
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
+ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118
Query: 433 HLNAKCHACIGGTNVREDIRQL-ENGVMLVVGHSR 534
+C +GG + E + EN +L+ R
Sbjct: 119 FTGLRCACLVGGDQIEEQFSTIHENPDILLATPGR 153
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
+ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118
Query: 433 HLNAKCHACIGGTNVREDIRQL-ENGVMLVVGHSR 534
+C +GG + E + EN +L+ R
Sbjct: 119 FTGLRCACLVGGDQIEEQFSTIHENPDILLATPGR 153
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/129 (33%), Positives = 66/129 (51%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 442 AKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKADEM 621
C+G E+ + +++G + + S + L +ADEM
Sbjct: 93 VNA-TCLGFDTTAEN----DKISHVLMGTPKDFL-----SNIPSDTSRIKMFVLDEADEM 142
Query: 622 LSRGFKGQI 648
LS+GFK QI
Sbjct: 143 LSKGFKDQI 151
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 167 MNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKDAMLSLKPSQELEKLLLSL 319
M LKEELLRGIY +GFEKPSAIQ+ A+ P + ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.1 bits (139), Expect = 2e-09
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 10/141 (7%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 405
+Q RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQP 585
++ G L K + IGG + + +L GV +V+ + + R Q
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQ-- 452
Query: 586 SNFWFLMKADEMLSRGFKGQI 648
+ L +AD ML GF+ +
Sbjct: 453 CTYVILDEADRMLDMGFEPDV 473
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 79 LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138
Query: 436 LNAKCHACIGGTNVREDIRQLENGVMLVV 522
+ +GG ++ L ++V
Sbjct: 139 IGLIAAVIVGGVDMAAQAMALARRPHIIV 167
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135
Query: 436 L-NAKCHACIGGTNVREDIRQLENGV-MLVVG 525
L K GG +++D +L N +VVG
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135
Query: 436 L-NAKCHACIGGTNVREDIRQLENGV-MLVVG 525
L K GG +++D +L N +VVG
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 75 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 134
Query: 436 L-NAKCHACIGGTNVREDIRQLENGV-MLVVG 525
L K GG +++D +L N +VVG
Sbjct: 135 LPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 166
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 442 AKCHACIGGTNVREDIRQL-ENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKADE 618
A+ +GG+ + ++ L + +V+G + + A +F+ L +AD+
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQL--VKLGAMNMSHVDFFVLDEADK 175
Query: 619 MLSRGFKGQI 648
++ F+ I
Sbjct: 176 LMDEVFRDDI 185
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 442 AKCHACIGGTNVREDIRQL-ENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFLMKADE 618
A+ +GG+ + ++ L + +V+G + + A +F+ L +AD+
Sbjct: 118 ARTSVYVGGSAHKLNLIDLKQTRPQIVIGTPGRIAQL--VKLGAMNMSHVDFFVLDEADK 175
Query: 619 MLSRGFKGQI 648
++ F+ I
Sbjct: 176 LMDEVFRDDI 185
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 56.4 bits (130), Expect = 2e-08
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 414
+ + GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVV-GHSRSCIWI**TRPCASCQQPSN 591
L K GG + E I L+ G +VV R + + +
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVT 456
Query: 592 FWFLMKADEMLSRGFKGQI 648
+ L +AD M +GF+ QI
Sbjct: 457 YLVLDEADRMFDKGFEPQI 475
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIAL 426
+ G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL 242
Query: 427 GDHLNAKCHACIGGTNVREDIRQLENGVMLVV 522
+ + C GG +++ L +G +VV
Sbjct: 243 STFIQLEVCLCAGGLDLKAQEAALRSGPDVVV 274
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 53 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 226
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 227 AIQQRAI 247
IQQ I
Sbjct: 173 PIQQACI 179
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 423
+ G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNFWFL 603
+G H C IGG++V + R +G+ ++V + SC L
Sbjct: 171 VGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPGRLLQHMDENAQMSCDS-LQVLVL 228
Query: 604 MKADEMLSRGFKGQI 648
+AD ML GF Q+
Sbjct: 229 DEADRMLDMGFSKQL 243
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 51.6 bits (118), Expect = 7e-07
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 411
+ GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284
Query: 412 VVIALGDHL------NAKCHACIGGTNVREDIRQLENGVMLVVG-HSRSCIWI**TRPCA 570
++I + D L + CIGG + E + + +G+ +VV R + T+
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDML--TKKII 342
Query: 571 SCQQPSNFWFLMKADEMLSRGFKGQI 648
+ + + L +AD ML GF+ +I
Sbjct: 343 NL-EVCRYLVLDEADRMLDMGFEDEI 367
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 438
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 439 NAKCHACIGGTNVREDIRQLEN 504
N GG V ++I+ +N
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKN 129
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQI 405
+ G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI
Sbjct: 416 LDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ + + + G ++ + ++ NG +++G
Sbjct: 476 HEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIG 515
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIA 423
++G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+
Sbjct: 103 LEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLENGVMLVV 522
L + N +GG+N + +L GV ++V
Sbjct: 163 LLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILV 195
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVG 474
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVG 474
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVG 474
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLENGVMLVVGHSRSCIWI**TR-- 561
LA QI K N + GG N R+ + +L G +++ I I
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFI 293
Query: 562 PCASCQQPSNFWFLMKADEMLSRGFKGQI 648
A C+ + L +AD ML GF+ QI
Sbjct: 294 GLAGCR----YLVLDEADRMLDMGFEPQI 318
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLENGVMLVVGHSRSCIWI**TR-- 561
LA QI K N + GG N R+ + +L G +++ I I
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFI 277
Query: 562 PCASCQQPSNFWFLMKADEMLSRGFKGQI 648
A C+ + L +AD ML GF+ QI
Sbjct: 278 GLAGCR----YLVLDEADRMLDMGFEPQI 302
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLENGVMLVVGHSRSCIWI**TR-- 561
LA QI K N + GG N R+ + +L G +++ I I
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFI 274
Query: 562 PCASCQQPSNFWFLMKADEMLSRGFKGQI 648
A C+ + L +AD ML GF+ QI
Sbjct: 275 GLAGCR----YLVLDEADRMLDMGFEPQI 299
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 45.2 bits (102), Expect = 6e-05
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQIQKVVI 420
+ GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+ +
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAK 359
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLEN-GVMLVVGHSRSCIWI**TRPCASCQQPSNFW 597
N GG + E +L+N G +VV I + + A+ + F
Sbjct: 360 KFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDL--VKMGATNFLRTTFL 417
Query: 598 FLMKADEMLSRGFKGQI 648
+AD M GF+ Q+
Sbjct: 418 VFDEADRMFDMGFEAQV 434
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVG 685
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVG 685
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 414
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG NV + Q+ G ++VG
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVG 431
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 414
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG NV + Q+ G ++VG
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVG 431
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVG 525
+ GG V + Q+E G ++VG
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVG 685
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 402
+ G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQ
Sbjct: 119 LSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178
Query: 403 IQKVVIALGDHLNAKCHACI-GGTNVREDIRQLENGVMLVV 522
I+ V N C+ GG + E + GV +V+
Sbjct: 179 IEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVI 217
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 412 VVIALGDHLNAKCHACIGG 468
+ AL + +GG
Sbjct: 87 HINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 412 VVIALGDHLNAKCHACIGG 468
+ AL + +GG
Sbjct: 254 HINALISTTQLIATSIVGG 272
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 414
++ ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLENGVMLVVGHSRSCIWI**TRPCASCQQPSNF 594
+ L L + N E+ LE+ +VV + + RP C S +
Sbjct: 183 FVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRP-EYCTLVS-Y 240
Query: 595 WFLMKADEMLSRGFKGQI 648
+ +AD +LS G++ ++
Sbjct: 241 LVMDEADLLLSFGYEEEM 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 116 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
+ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 771 MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEN 504
L KC GG + +++ L +
Sbjct: 831 FTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
+ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 771 MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLEN 504
L KC GG + +++ L +
Sbjct: 831 FTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 36.7 bits (81), Expect = 0.020
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 393
GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 394 AQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLENGVMLVVGHSRSCIWI**TRPCA 570
+ QI GG N ++ I +L G +++ I +
Sbjct: 263 SLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDV--MDQGL 320
Query: 571 SCQQPSNFWFLMKADEMLSRGFKGQI 648
+ + L +AD ML GF+ QI
Sbjct: 321 IGMEGCRYLVLDEADRMLDMGFEPQI 346
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.7 bits (76), Expect = 0.081
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGD 432
++ RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWND 213
Query: 433 HLN-AKCHACIGGTNVREDIRQL 498
AK + G + ++ RQL
Sbjct: 214 ESGVAKVVSLSGANDFEKEARQL 236
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 402
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 450
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 451 HA-CIGGTNVREDI 489
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 113 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 15
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
F +VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1334 FESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQ 333
A + G D + A++G+GKT FS+ I Q
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 541 YTTWSAQQLT*HHSPVGEYLHGHWCHQCKHGI*HSSDHQELSPP 410
+T S QQ HHS G L GH + G+ H+ HQ++ PP
Sbjct: 486 FTQGSNQQQNPHHSQGGHQL-GH-SNVRMGGLNHNQHHQQIGPP 527
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIREC 360
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 83 DPSMAHFWNPLANLLTFFQTNKT 15
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical
protein F43G6.11b protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 791 LVQRYAVPGISPIKASEVTSKYHPSGHGKPES-KYDLNIKLTTS*GHH--GIWP 639
+ +YA+ + K + V YH +G+G +S K + I LT+ GHH WP
Sbjct: 151 IAAKYAIEKLEVKKVAIVDFDYH-AGNGTYQSVKDESRIHLTSFHGHHFGAFWP 203
>Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical
protein F43G6.11a protein.
Length = 508
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -2
Query: 791 LVQRYAVPGISPIKASEVTSKYHPSGHGKPES-KYDLNIKLTTS*GHH--GIWP 639
+ +YA+ + K + V YH +G+G +S K + I LT+ GHH WP
Sbjct: 151 IAAKYAIEKLEVKKVAIVDFDYH-AGNGTYQSVKDESRIHLTSFHGHHFGAFWP 203
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 822 PFPGVKASSLSGTKVCRTRNLSNKG 748
PFP +S S T +C NL+N G
Sbjct: 429 PFPSDDSSDYSATGICEFSNLTNNG 453
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 26 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 166
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,388
Number of Sequences: 27780
Number of extensions: 491037
Number of successful extensions: 1417
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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