Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30514
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 113 MRAFVV--LACVAMAYGRPEPPVGYSY 187
           MR FV+  +ACV++A  RPE      Y
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKY 27


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 825 RPNSHPPKAFPPNCHP 778
           R   H P+ +PP C P
Sbjct: 20  RKRPHSPEPYPPRCPP 35


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
 Frame = +3

Query: 435 SSCTETHLCS-RTSP----RTS*AKTSSYPAVAPPQKHYKIIFIKGPTLPTPT-GPHNFL 596
           S+CT T L + R SP    R   A  S  P V  P  H  I      + P PT    + +
Sbjct: 253 STCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNPPDH--IQQATPYSAPGPTYSTWSTV 310

Query: 597 SNHKNEEEDTRNMCWV*ESLKKQALIINYSPTPSNPIQPLQKPGSLTFNQNFPN 758
                    T N CW   S       I+  PTPS     + +P +   N  +P+
Sbjct: 311 QTPTTVMSPTIN-CWSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPS 363


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 590 IMGASRSGKSWALDEDDLV 534
           I+G    G++W +DED  +
Sbjct: 286 ILGIPAYGRAWKMDEDSSI 304


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 639 WV*ESLKKQALIINYSPTPSNPIQPLQKPGSLTFNQNFPNPKRE 770
           WV E L     +  Y  T +  IQ +Q P ++T ++NF  P RE
Sbjct: 442 WVDEILANHNDV--YFVTMTQVIQWIQNPRTITESKNF-EPWRE 482


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 546 FIKGPTLPTPTGPHNFLSNHKNEEEDTRNMCWV 644
           F+K P  P   G  +F S H +      N C++
Sbjct: 198 FVKVPRTPDKPGKGSFWSLHPDSGNMFENGCYL 230


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 830 PSARIPTPQRPSPQIA 783
           P   IP+P+R SP +A
Sbjct: 73  PKREIPSPKRSSPILA 88


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 41  LIGY*INYHRVS 76
           L+GY INY R+S
Sbjct: 112 LLGYSINYRRIS 123


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 704 NSAPPKTGKFNLQSKFSKP 760
           N +PPKT  FNL  +   P
Sbjct: 69  NVSPPKTKFFNLIKRKDSP 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,763
Number of Sequences: 336
Number of extensions: 3650
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)