Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30514
(836 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.7
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 31 3.9
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 31 3.9
U59479-1|AAB03391.1| 99|Homo sapiens neutrophil protein protein. 31 3.9
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 31 3.9
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 31 3.9
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein. 31 3.9
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 30 9.0
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 30 9.0
AK223576-1|BAD97296.1| 155|Homo sapiens cysteine and tyrosine-r... 28 9.7
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -3
Query: 423 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNTT 250
ST S T S+ ++ + +A STT T + SAA + S T S +TT +T
Sbjct: 413 STTSSPTTSTTSATTTSTTSAPTSSTTSTPQTSKTSAATSSTTSSSGTTPSPVTTTST 470
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSVRRQGKCCLQKGHLGIQNDHQYNSSVSAAD 230
+R R +GR H+RDR H++SV R+ ++ G++ H+ + S+ D
Sbjct: 625 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 668
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSVRRQGKCCLQKGHLGIQNDHQYNSSVSAAD 230
+R R +GR H+RDR H++SV R+ ++ G++ H+ + S+ D
Sbjct: 657 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 700
>U59479-1|AAB03391.1| 99|Homo sapiens neutrophil protein protein.
Length = 99
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSVRRQGKCCLQKGHLGIQNDHQYNSSVSAAD 230
+R R +GR H+RDR H++SV R+ ++ G++ H+ + S+ D
Sbjct: 13 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 56
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSVRRQGKCCLQKGHLGIQNDHQYNSSVSAAD 230
+R R +GR H+RDR H++SV R+ ++ G++ H+ + S+ D
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 674
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSVRRQGKCCLQKGHLGIQNDHQYNSSVSAAD 230
+R R +GR H+RDR H++SV R+ ++ G++ H+ + S+ D
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRK-----RRDTSGLERSHKSSKGGSSRD 674
>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
Length = 1795
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 830 PSARIPTPQRPSPQIATHQEFPFGVWKILIEG*TSRFLE 714
P IP P+RP QE P GV +IL+E T + +E
Sbjct: 1665 PQDGIPPPKRPLKVSQKEQEAPVGVLRILLEEITMKVVE 1703
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 281
+R R +GR H+RDR H++SV +R+ L++ H
Sbjct: 500 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 533
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = -2
Query: 376 NRCRRQGRVHHRDRVHQKSV--RRQGKCCLQKGH 281
+R R +GR H+RDR H++SV +R+ L++ H
Sbjct: 631 SRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSH 664
>AK223576-1|BAD97296.1| 155|Homo sapiens cysteine and tyrosine-rich
1 protein precursor variant protein.
Length = 155
Score = 27.9 bits (59), Expect(2) = 9.7
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +3
Query: 441 CTETHLCSRTSP-RTS*AKT-SSYPAVAPPQKH-YKIIF---IKGPTLPTPTGP 584
C + H +R RT+ T SSYPA PP H +++ + + P PTP GP
Sbjct: 87 CMKNHRATRVGILRTTHINTVSSYPAGPPPYGHDHEMEYCADLPPPYSPTPQGP 140
Score = 21.0 bits (42), Expect(2) = 9.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 681 YSPTPSNPIQPLQKP 725
YSPTP P Q P
Sbjct: 133 YSPTPQGPAQRSPPP 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,841,979
Number of Sequences: 237096
Number of extensions: 2541945
Number of successful extensions: 7642
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7634
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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