Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30514
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 32 0.58
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 30 2.3
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 3.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 3.1
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 29 4.1
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 29 5.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 28 7.2
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 28 9.5
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 28 9.5
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 28 9.5
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 28 9.5
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 28 9.5
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 28 9.5
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 28 9.5
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 126 WYSPVWLWPMAALNLQW--DTATPL--PEVTQEASALPLSAADTELLYWWSFWIPRWPFW 293
W +W++PMA + L W DT P+ P V + S L + + Y+W +I W
Sbjct: 98 WNQLLWIYPMALVQLIWVPDTELPILAPTVFEMLSQLAIFFLAFDFTYFWFHYINHKVKW 157
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 256
ST +T S TES+ TS T + ESTTE+ S S + S T +
Sbjct: 189 STTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDS 248
Query: 255 TT 250
TT
Sbjct: 249 TT 250
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 256
+T ST S TES+ TS T + ESTTE+ S S + ++ + + TT
Sbjct: 209 TTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTE 268
Query: 255 TT 250
+T
Sbjct: 269 ST 270
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETES 331
ST ST + TES+ TS T + ESTTE+ S
Sbjct: 241 STSTSTDSTTTESTSTSTDSTTTESTTESTTESTS 275
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTE--TESIRRVSAAKGNAASRKAT*GSRMT 262
ST ST + TES+ S ++ + + +TTE TES ++ ++ + ++T S +
Sbjct: 201 STSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDS 260
Query: 261 TNT 253
T T
Sbjct: 261 TTT 263
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 498 SSYPAVAPPQKHYKIIFIKGPTLPTPTGPHNFLSNHKNEEEDTRNMC---WV*ESLKKQA 668
++ PA+ PP + K I+ P TP ++ K E+ + + KK A
Sbjct: 340 TALPAIVPPDQVQKASSIRKPATVTPDKSIKKSASRKRSEKQEMQLVRYELTPKKSKKSA 399
Query: 669 LIINYSPTPSNPIQPLQKP 725
II+++ P N ++ KP
Sbjct: 400 KIIHHAALPPNMMKTSSKP 418
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 489 AKTSSYPAVAPPQK-HYKIIFIKGPTLPTPTGPHNFLSNHKNEEEDTRNMCWV*ESLKKQ 665
A TS P+VAP H I+ +L P + E+E+T + +S K Q
Sbjct: 5 AATSGPPSVAPRGSVHTNGFGIERGSLRRPPEQFEMQEKKRKEQENTFLRSSLRKSKKLQ 64
Query: 666 ALIINYSPTPSNPIQPLQKPGSLTFNQNFPNPKRE 770
AL N P + P++ L + P+ K E
Sbjct: 65 ALARNVDPLTNEPMKVTSFANPLAEVEETPSRKTE 99
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 822 PNSHPPKAFPPNCHPPRIPF 763
P + PPK PP PP IP+
Sbjct: 413 PKTTPPKTEPPTTEPPNIPY 432
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 259
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 259
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 259
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 435 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTT 259
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTT 239
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 573 PTGPHNFLSNHKNEEEDTRNMCWV*ESLKKQALIINYSPTPSNPIQPLQKPGSLT-FNQN 749
P P N + + E+DTR++ SL K+ L +++SPT S Q P +L F
Sbjct: 1836 PINPSN-IEHLSTAEDDTRHLFEKHGSLLKKGLSLSHSPTLSELCTKGQPPPALKHFTYT 1894
Query: 750 FPNPK 764
+ P+
Sbjct: 1895 YSEPQ 1899
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 469 PPPEPVEQRLPRILLWLHPRNITRSSSSRAQLFPLLLAPIISYP 600
P P E++ R+ +N TR SS+ LF +LLA +I P
Sbjct: 449 PSPPRNERKRSRMSTTTPMKNGTRDGSSKVTLFAMLLAVLIFNP 492
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 573 PTGPHNFLSNHKNEEEDTRNMCWV*ESLKKQALIINYSPTPSNPIQPLQKPGSLTFNQNF 752
P P N + + E+DTR++ SL K+ L +++SPT S Q P + + + F
Sbjct: 1900 PINPSN-IEHLSTAEDDTRHLFEKHGSLLKKGLSLSHSPTLSELCTKGQPPPAQSADLQF 1958
Query: 753 PNPKREFL 776
REFL
Sbjct: 1959 ---LREFL 1963
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -3
Query: 513 QQDTRKSLLNWFWGRYVNIDVFLYKRSTRVSTRISATESSITSEAQTAAAAKGESTTETE 334
+ DT K+L++ + +++N D+FL++ T + E + T + + + T + E
Sbjct: 248 EPDTLKNLVHKY-SQFINFDIFLWQSKTEMVEEAVEEEPATTEDGAVEEEKEEKKTKKVE 306
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 423 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 280
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 457 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 502
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = -3
Query: 423 STRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT 280
+T SAT S++TS+ +++A G ST T++ + S+ + S +T
Sbjct: 460 ATGSSATGSTVTSDVASSSATGGSSTNATDTTQ--SSTDASTVSTSST 505
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 463 HVPPPEPVEQRLPRILL 513
H PPP PVE++L ++L+
Sbjct: 162 HPPPPPPVEEKLDQVLI 178
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 463 HVPPPEPVEQRLPRILL 513
H PPP PVE++L ++L+
Sbjct: 117 HPPPPPPVEEKLDQVLI 133
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 463 HVPPPEPVEQRLPRILL 513
H PPP PVE++L ++L+
Sbjct: 212 HPPPPPPVEEKLDQVLI 228
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 830 PSARIPTPQRPSPQIATHQEFP 765
P +IP PQ P Q+ HQ+ P
Sbjct: 258 PQQQIPQPQTPQQQVQQHQQRP 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,246,421
Number of Sequences: 27780
Number of extensions: 352235
Number of successful extensions: 1346
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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