Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30513
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 85 4e-17
01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297 36 0.021
06_03_1120 - 27765613-27765963 34 0.066
03_04_0043 + 16747103-16747137,16747237-16747259,16748735-167488... 32 0.35
05_07_0342 + 29402867-29402906,29403012-29403052,29403146-294032... 31 0.46
05_03_0462 - 14316486-14316602,14316689-14316793,14318406-143184... 31 0.81
08_01_0328 + 2959014-2959055,2959336-2959398,2960871-2960949,296... 30 1.1
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 30 1.1
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 30 1.1
05_04_0169 - 18694418-18694453,18694516-18694627,18696095-186962... 30 1.4
02_05_0887 + 32516255-32517292 29 3.3
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 28 4.3
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 28 5.7
07_03_1222 - 24983294-24983356,24983695-24983858,24985209-249852... 27 7.5
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 27 7.5
02_01_0209 - 1399613-1399622,1399719-1399764,1399849-1399927,140... 27 7.5
08_02_0491 + 17749763-17750143,17750694-17750751,17750846-177508... 27 10.0
06_01_0045 + 420300-420530,422730-423006,423974-424014 27 10.0
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 27 10.0
01_06_0117 + 26605186-26605443,26605540-26605583,26605659-266057... 27 10.0
>07_01_0479 + 3606663-3607448
Length = 261
Score = 85.0 bits (201), Expect = 4e-17
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKI-KSKNSK-T 234
M+ K +KM Q +NYR+RV +QD R +G F AFD+HMNL+LGDCEEFRK+ SK+SK T
Sbjct: 1 MSNPKGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTT 60
Query: 235 ADREEKR 255
+REE+R
Sbjct: 61 GEREERR 67
Score = 30.7 bits (66), Expect = 0.81
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 240 QRRKKTLGFVLLRGENIVSLTI 305
+ ++TLG +LLRGE +VS+T+
Sbjct: 63 REERRTLGLLLLRGEEVVSMTV 84
>01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297
Length = 104
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 97 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ R+ V L+ R G A+D+H+N+ILGD EE
Sbjct: 27 LDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEE 61
>06_03_1120 - 27765613-27765963
Length = 116
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 82 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFR---KIKSKNSKTADREEK 252
K+++ + R+ V + D R F+G F DK N++L D E+R + +S +S ++ E+
Sbjct: 24 KLRKMLFRRMLVGVNDGRYFLGLFHCVDKQGNILLQDAVEYRTSARRRSPSSPSSSPAEQ 83
Query: 253 R 255
R
Sbjct: 84 R 84
>03_04_0043 +
16747103-16747137,16747237-16747259,16748735-16748856,
16748980-16749042
Length = 80
Score = 31.9 bits (69), Expect = 0.35
Identities = 11/44 (25%), Positives = 29/44 (65%)
Frame = +1
Query: 70 GKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
G+ ++++++ ++++ L +R +GT + FD+ MNL++ + E
Sbjct: 5 GQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE 48
>05_07_0342 +
29402867-29402906,29403012-29403052,29403146-29403220,
29403523-29403648,29404195-29404247,29404385-29404475
Length = 141
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 85 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ ++ + VI D R +GT + FD+ N+IL + E
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>05_03_0462 -
14316486-14316602,14316689-14316793,14318406-14318486,
14318593-14318610
Length = 106
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = +1
Query: 100 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRL 258
N +V + ++++ +G +AFD+H N++L E R++ ++ KT ++K L
Sbjct: 31 NTQVLINCRNNKKLLGRVRAFDRHCNMVL---ENVREMWTEVPKTGKGKKKAL 80
>08_01_0328 +
2959014-2959055,2959336-2959398,2960871-2960949,
2961038-2961083,2961566-2961671
Length = 111
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 85 MQQHINYRVRVIL--QDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADR 243
M Q I R+++ L Q G FD++MNL+L D EE +K K+ R
Sbjct: 10 MTQPIKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI-NVKKDTRKSLGR 63
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 88 QQHINYRVRVILQDSRTFIGTFKAFDKHMN 177
+Q++N + R + D +FIG++K KH+N
Sbjct: 152 RQYLNRKKRACMHDGCSFIGSYKELCKHVN 181
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 106 RVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTADREEKRL 258
+V + Q+++ +G +AFD H N++L E R++ ++ KT ++K L
Sbjct: 383 KVLINCQNNKKLLGRVRAFDSHCNMVL---ENVREMWTEVPKTGKGKKKAL 430
>05_04_0169 -
18694418-18694453,18694516-18694627,18696095-18696243,
18696980-18697033,18697110-18697222,18697323-18697374
Length = 171
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 97 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 204
I ++ VI++ + +GT FD ++N++L D E+
Sbjct: 88 IGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTEY 123
>02_05_0887 + 32516255-32517292
Length = 345
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 88 QQHINYRVRVILQDSRTFIGTFKAFDKHM 174
+ ++N + R +QD +F+GT+K KH+
Sbjct: 149 RSYLNGKRRTCMQDGCSFVGTYKELRKHV 177
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 549 WKEGHPSWGLLAFEEEQKVDHDFLVPCVVEMARLLLWQDLEDPEVLRPGQCL 394
WK+ H WG F E K+ FLV V+E+ + Q + + +V RP +CL
Sbjct: 190 WKKEH-DWGWKKFMELSKIQDGFLVDDVLEIIAQV--QVIRE-KVDRPFRCL 237
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 52 SDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSK 231
+D+M + + + + I V D+R + D H++ + + EEF KI K +
Sbjct: 463 TDEM-VARLDSLDVEIGNHVSRCKADARLMKDELEKKDHHLSTVEKESEEFLKISEKKLE 521
Query: 232 TADRE 246
A RE
Sbjct: 522 DAKRE 526
>07_03_1222 -
24983294-24983356,24983695-24983858,24985209-24985231,
24985340-24985374
Length = 94
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 115 VILQDSRTFIGTFKAFDKHMNLILGDCEE 201
V L +R IGT + FD+ MNL++ + E
Sbjct: 34 VKLNANRVVIGTLRGFDQFMNLVVDNTVE 62
>04_03_1049 + 22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 215 NLKIVKLQTEKKKDFGFCSFTW 280
NLK+ +L+ ++ KD+ C+F+W
Sbjct: 1392 NLKMKRLRGDEIKDYFLCAFSW 1413
>02_01_0209 -
1399613-1399622,1399719-1399764,1399849-1399927,
1400004-1400162,1400988-1401050,1401154-1401222
Length = 141
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 154 KAFDKHMNLILGDCEEFRKIKSKNSKTADR 243
K FD++MNL+L + EE IK K+ R
Sbjct: 97 KGFDEYMNLVLDEAEEI-NIKKDTRKSLGR 125
>08_02_0491 +
17749763-17750143,17750694-17750751,17750846-17750891,
17750932-17750998,17751100-17751108
Length = 186
Score = 27.1 bits (57), Expect = 10.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 491 TTISWCHVLLRWPAYSSGRTLK 426
TT+ WC + WP G T++
Sbjct: 12 TTVQWCGCMASWPRRDHGATVR 33
>06_01_0045 + 420300-420530,422730-423006,423974-424014
Length = 182
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 494 LTTISWCHVLLRWPAYSSGRTL 429
LT WC+ +RW A+ +G TL
Sbjct: 125 LTPWRWCNQAVRWLAWKTGTTL 146
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 549 WKEGHPSWGLLAFEEEQKVDHDFLVPCVVEM 457
WK+ H WG F E K+ FLV V+E+
Sbjct: 156 WKKEH-DWGWKKFMELSKIQDGFLVDDVLEI 185
>01_06_0117 +
26605186-26605443,26605540-26605583,26605659-26605737,
26605822-26605944,26606300-26606482,26606562-26606648,
26608149-26608255,26608387-26608474,26608805-26608885,
26608983-26609059,26609183-26609318,26609548-26609610,
26609983-26610563,26610816-26610933
Length = 674
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 163 DKHMNL-ILGDCEEFRKIKSKNSKTADREEKRLWVLFF 273
DKH+ + ILG+ +F +NS A +E+R ++ F
Sbjct: 254 DKHVKVGILGNAVDFHDNDPRNSTLASNDERRKMMIAF 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,164,464
Number of Sequences: 37544
Number of extensions: 173623
Number of successful extensions: 573
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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