Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30513
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.0  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    23   8.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   8.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 438 QDLEDPEVLRPGQCLYQQHEHFQA 367
           +D ED + L   Q   QQH+H QA
Sbjct: 629 EDEEDQQHLLQQQQQQQQHQHHQA 652


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 335 QSFFWWRWSFD 303
           +S +WWRW +D
Sbjct: 5   RSCWWWRWWWD 15


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 229 KTADREEKRLWVLFF 273
           KT D+ ++ +W LFF
Sbjct: 423 KTLDKNKEEIWQLFF 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,806
Number of Sequences: 2352
Number of extensions: 6984
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)