Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30513
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprot... 128 5e-30
AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p pro... 128 5e-30
AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA... 128 5e-30
BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p pro... 46 5e-05
AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA ... 46 5e-05
BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p pro... 36 0.036
AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-P... 36 0.036
BT022486-1|AAY54902.1| 121|Drosophila melanogaster IP06106p pro... 36 0.048
AE014134-505|AAN10396.1| 121|Drosophila melanogaster CG31950-PA... 36 0.048
AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p pro... 33 0.26
AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA... 33 0.26
AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p pro... 31 1.0
AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA... 31 1.0
AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 30 1.8
AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 30 1.8
>L02919-1|AAA28858.1| 199|Drosophila melanogaster ribonucleoprotein
protein.
Length = 199
Score = 128 bits (309), Expect = 5e-30
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 240
MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60
Query: 241 REEKRL 258
REEKR+
Sbjct: 61 REEKRV 66
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 QRRKKTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
+ K+ LGFVLLRGENIVSLT+
Sbjct: 61 REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120
Query: 414 XXXXXXXXXRGVGGPSQQHMAPGNRG 491
RGVGGP+QQHMAP RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146
>AY061171-1|AAL28719.1| 199|Drosophila melanogaster LD14049p
protein.
Length = 199
Score = 128 bits (309), Expect = 5e-30
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 240
MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60
Query: 241 REEKRL 258
REEKR+
Sbjct: 61 REEKRV 66
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 QRRKKTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
+ K+ LGFVLLRGENIVSLT+
Sbjct: 61 REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120
Query: 414 XXXXXXXXXRGVGGPSQQHMAPGNRG 491
RGVGGP+QQHMAP RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146
>AE014134-1881|AAF52947.1| 199|Drosophila melanogaster CG5352-PA
protein.
Length = 199
Score = 128 bits (309), Expect = 5e-30
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNSKTAD 240
MTIGKNNKM QH+NYRVR++LQDSRTFIGTFKAFDKHMNLILGDCEEFRKI+SKNSK +
Sbjct: 1 MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60
Query: 241 REEKRL 258
REEKR+
Sbjct: 61 REEKRV 66
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/86 (34%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 QRRKKTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
+ K+ LGFVLLRGENIVSLT+
Sbjct: 61 REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120
Query: 414 XXXXXXXXXRGVGGPSQQHMAPGNRG 491
RGVGGP+QQHMAP RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146
>BT023632-1|AAY85032.1| 95|Drosophila melanogaster IP05684p
protein.
Length = 95
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 85 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ +IN+ V +I D R FIGT K FD+ +N+I+ +C E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>AE014296-355|AAF47567.1| 95|Drosophila melanogaster CG2021-PA
protein.
Length = 95
Score = 45.6 bits (103), Expect = 5e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 85 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ +IN+ V +I D R FIGT K FD+ +N+I+ +C E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>BT001552-1|AAN71307.1| 103|Drosophila melanogaster RE11655p
protein.
Length = 103
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 97 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ +V V +++ R G AFD+H+N++LGD EE
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEE 60
>AE014297-3433|AAN13967.1| 103|Drosophila melanogaster CG31184-PA
protein.
Length = 103
Score = 35.9 bits (79), Expect = 0.036
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 97 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
++ +V V +++ R G AFD+H+N++LGD EE
Sbjct: 26 LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEE 60
>BT022486-1|AAY54902.1| 121|Drosophila melanogaster IP06106p
protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.048
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 204
+T G+ K+Q+ + +R+++ D R +G F D+ N++L C E+
Sbjct: 38 LTPGRR-KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY 84
>AE014134-505|AAN10396.1| 121|Drosophila melanogaster CG31950-PA
protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.048
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +1
Query: 61 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 204
+T G+ K+Q+ + +R+++ D R +G F D+ N++L C E+
Sbjct: 38 LTPGRR-KLQKWLGRVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEY 84
>AY113521-1|AAM29526.1| 91|Drosophila melanogaster RE60135p
protein.
Length = 91
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 40 LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 204
+P S+ T+ + + I R+ +I+++ + +GT FD +N++L D E+
Sbjct: 4 VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEY 58
>AE014296-1060|AAF50703.1| 91|Drosophila melanogaster CG6610-PA
protein.
Length = 91
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 40 LPNHSDKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 204
+P S+ T+ + + I R+ +I+++ + +GT FD +N++L D E+
Sbjct: 4 VPPPSNISTLMPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEY 58
>AY070698-1|AAL48169.1| 76|Drosophila melanogaster RH35475p
protein.
Length = 76
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 82 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNS 228
+++++++ R+ + L R G + FD MN++L D E K +KN+
Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNN 56
>AE014298-2437|AAF48634.1| 76|Drosophila melanogaster CG9742-PA
protein.
Length = 76
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 82 KMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNS 228
+++++++ R+ + L R G + FD MN++L D E K +KN+
Sbjct: 8 EVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNN 56
>AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p
protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 100 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
N +V + ++++ +G KAFD+H N++L + +E
Sbjct: 38 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 71
>AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA
protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 100 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 201
N +V + ++++ +G KAFD+H N++L + +E
Sbjct: 38 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 71
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,916,893
Number of Sequences: 53049
Number of extensions: 297899
Number of successful extensions: 820
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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