Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30513
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.3  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 441 WQDLEDPEVLRPGQCLYQQHEHFQAR 364
           W+D +DP+    G+  YQ      AR
Sbjct: 392 WEDTQDPQGCGAGKENYQTMSRDPAR 417


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 408  PGQCLYQQHEHFQA 367
            P  CL+++ EHF A
Sbjct: 1612 PKNCLFRKPEHFVA 1625


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 441 WQDLEDPEVLRPGQCLYQQHEHFQAR 364
           W+D +DP+    G+  YQ      AR
Sbjct: 392 WEDTQDPQGCGAGKENYQTMSRDPAR 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,811
Number of Sequences: 438
Number of extensions: 1867
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)