Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30511
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 367 LLPLKLEIHWLSDLKLWIPTHHSRSSCENLLPWN 468
           L  +KL ++ LSD+ LW+   +S +       WN
Sbjct: 130 LTDIKLVLNILSDVTLWLSNVNSLTLTLKRKKWN 163


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 367 LLPLKLEIHWLSDLKLWIPTHHSRSSCENLLPWN 468
           L  +KL ++ LSD+ LW+   +S +       WN
Sbjct: 56  LTDIKLVLNILSDVTLWLSNVNSLTLTLKRKKWN 89


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 SSDLGLAVTCQYDLT-NKTVAKKSILEFTETF 285
           ++ + LA+TC Y+L+ NKT+  +   E TE +
Sbjct: 302 TTSITLALTC-YELSLNKTIQDRLRHEVTEIY 332


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 256 SWQQSCLSNHTDK*PLNQD 200
           +W+  C SN+  K P+  D
Sbjct: 24  AWRWECKSNYCQKAPITPD 42


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 77  LCLTSTTQEFGLPLA*ILPSNNLD 6
           +CL  T +E+G P+  +    + D
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDAD 206


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 77  LCLTSTTQEFGLPLA*ILPSNNLD 6
           +CL  T +E+G P+  +    + D
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDAD 206


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 452 TCCHGMVLTPAKSRLSTAMLP 514
           T C  ++LTP   R+ T  +P
Sbjct: 7   TLCAFLILTPTDQRVVTRTIP 27


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 229 DLTNKTVAKKSILEFTETF 285
           D T +    KS LEF ET+
Sbjct: 115 DATKRATMAKSALEFFETY 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,518
Number of Sequences: 336
Number of extensions: 3840
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)