Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30511
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 38 0.007
Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 33 0.21
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 32 0.36
Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter... 30 1.9
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 30 1.9
Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical ... 29 3.4
Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical p... 28 5.9
AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic ace... 28 5.9
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 28 7.8
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 28 7.8
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Frame = +1
Query: 1 QTSKLFDGKIYAKG--SPNSCVVDVKQSLEFELHMGYNNIECNVKQNGL------GRYLN 156
+T + F G+I+ KG +CV D S ++ N CN+++ + G ++
Sbjct: 45 KTQRPFHGRIFVKGMVDKQACVRDFVTSQAKDVTFELENGACNMRRQRMLGPEKRGMEMS 104
Query: 157 -DVVIQHHDTIVTSSDLGLAVTCQYDLTNKTVAKKSILEFTETFKLV 294
V+I H T +T D TC Y +K V K + T L+
Sbjct: 105 MTVIISFHSTFITKVDRAYRCTCFYMEADKVVTNKFDVSMLPTTDLI 151
>Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical
protein T04F8.4 protein.
Length = 384
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Frame = +1
Query: 1 QTSKLFDGKIYAKGSPN--SCVVDVKQSLEFELHMG---YNNIECNVKQNGL----GRYL 153
+T K F+GK+Y KGS N C VD +F +G N+ CN+ + + G
Sbjct: 48 RTRKQFNGKVYVKGSYNRPECRVDYSTKDQFGRPVGGIKLNHGACNMDRQRMIAPEGMMF 107
Query: 154 NDV-VIQHHDTIVTSSDLGLAVTCQYDLTNKTV 249
+ V +I H +T D + C Y +TV
Sbjct: 108 STVLIISFHPLFLTRMDKAYHIRCMYKEAARTV 140
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +1
Query: 16 FDGKIYAKGSPNSCVVDVKQSLEFELHMGY--NNIECNVKQNGLGRYLNDVVIQHHDTIV 189
+ G +YA + C V VK S F + + +N CN + L ++ ++I +D I+
Sbjct: 600 YTGVVYASERFDQCRVFVKNSSAFSIFIPRPKHNSWCNAVE--LNNEMSTIIIMSNDRIL 657
Query: 190 -----TSSDLGLAVTCQYDLTNKTVAKKSIL 267
T DL V+CQY+ + K I+
Sbjct: 658 PHDVTTKDDLFYQVSCQYNPNDDAKVSKGIV 688
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = +1
Query: 1 QTSKLFDGKIYAKG--SPNSCVVDVKQSLEFELHMGYNNIECNV----KQNGLGRYLN-D 159
+T F+G +Y KG S C D +LE ++++ + C+V N G +
Sbjct: 44 KTQGAFEGHVYVKGHYSMKHCRTDA--TLESQVNLTVSYSACDVIRQRSSNPKGIMMTAT 101
Query: 160 VVIQHHDTIVTSSDLGLAVTCQYDLTNKTVAKK 258
++I H +T D V C Y KTV ++
Sbjct: 102 IIISFHPMFITKIDKSYKVQCFYAEAQKTVTQQ 134
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Frame = +1
Query: 91 LHMGYNNIECNVKQNGL---GRYLNDVVIQHHDT-------IVTSSDLGLAVTCQYDLTN 240
LH +N ++C ++G+ R +N V +Q +DT + ++ ++ +C Y+
Sbjct: 186 LHHAFNKLQCEALESGIVAKEREINWVDVQSNDTNLVEFLQLFEDAEKCISKSCSYNDLE 245
Query: 241 KTV--AKKSILEFTETFKLVCPRKLL*THPT 327
+ + +KK E T +C RK++ PT
Sbjct: 246 RLIFQSKKDWFELYSTEFFICKRKMMLDKPT 276
>Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical
protein F22B5.3 protein.
Length = 389
Score = 32.7 bits (71), Expect = 0.27
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Frame = +1
Query: 4 TSKLFDGKIYAKG--SPNSCVVDV--KQSLEFELHMGYNNIECNVKQNGLGRYLND-VVI 168
T F+G +Y KG C D +Q EL N+ N G ++ VV+
Sbjct: 45 TRNAFEGHVYVKGLFDQQECRNDEGGRQVAGIELPFDTCNVARTRSLNPKGVFVTTTVVV 104
Query: 169 QHHDTIVTSSDLGLAVTCQYDLTNKTVAKK-SILEFTETFK 288
H VT D V C Y +KTV+ + + + T F+
Sbjct: 105 SFHPQFVTKVDRAYRVQCFYMEADKTVSTQIEVSDLTTAFQ 145
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +1
Query: 1 QTSKLFDGKIYAKGSP--NSCVVD-----VKQSLEFELHMGYNNIECNVKQNGLGRYLN- 156
+T K+F G+IYAKG C D + F+L G ++ + G Y
Sbjct: 44 KTRKIFAGRIYAKGRAELEDCYKDDFGNQKTRKPHFDLQFGACGMKSLRSVDPRGMYYGI 103
Query: 157 DVVIQHHDTIVTSSDLGLAVTCQYDLTNK 243
VV+ H +T D V C ++ NK
Sbjct: 104 TVVVSFHPLFITKVDQAYHVKCFFEEANK 132
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 32.3 bits (70), Expect = 0.36
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +1
Query: 1 QTSKLFDGKIYAKGSP--NSCVVD-----VKQSLEFELHMGYNNIECNVKQNGLGRYLN- 156
+T K+F G+IYAKG C D + F+L G ++ + G Y
Sbjct: 44 KTRKIFAGRIYAKGRAELEDCYKDDFGNQKTRKPHFDLQFGACGMKSLRSVDPRGMYYGI 103
Query: 157 DVVIQHHDTIVTSSDLGLAVTCQYDLTNK 243
VV+ H +T D V C ++ NK
Sbjct: 104 TVVVSFHPLFITKVDQAYHVKCFFEEANK 132
>Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical
protein C47G2.1 protein.
Length = 424
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Frame = +1
Query: 4 TSKLFDGKIYAKG--SPNSCVVDV--KQSLEFELHMGYNNIECNVKQNGLGRYLND-VVI 168
T F+G +Y KG C D +Q EL N N G +++ VVI
Sbjct: 44 TRNPFEGHVYVKGLYDQAGCRSDEGGRQVAGIELPFDSCNTARTRSLNPKGVFVSTTVVI 103
Query: 169 QHHDTIVTSSDLGLAVTCQYDLTNKTVAKK-SILEFTETFK 288
H VT D + C Y ++KTV+ + + + T F+
Sbjct: 104 SFHPQFVTKVDRAYRIQCFYMESDKTVSTQIEVSDLTTAFQ 144
>U00031-9|AAK18871.1| 470|Caenorhabditis elegans Hypothetical
protein B0361.8 protein.
Length = 470
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 373 PLKLEIHWLSDLKLWIPTHHSRSSCENLLPWNGVDSSEITLIDSN-VALQNILSWGPL 543
PL L LS K+ H+ SC+ L + V+S + T +S+ +A N+LSWG L
Sbjct: 158 PLSLPAFRLSGSKVVAYVHYPTISCDML---DVVESRQETFNNSSTIAQSNVLSWGKL 212
>U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform b protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 449 RTCCHGMVLTPAKSRLSTAMLPYRTFYHGGHLFKS 553
R CC+G T +S + ++ +R+FY GG F++
Sbjct: 448 RYCCYGTPPTRIRSATTDMVVLFRSFYRGGKGFEA 482
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 449 RTCCHGMVLTPAKSRLSTAMLPYRTFYHGGHLFKS 553
R CC+G T +S + ++ +R+FY GG F++
Sbjct: 448 RYCCYGTPPTRIRSATTDMVVLFRSFYRGGKGFEA 482
>Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical
protein C26D10.3 protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 107 TISNVMLNKTDLEGI*MTLL 166
T+ N++LNKTDLEGI T L
Sbjct: 421 TLENLILNKTDLEGISETFL 440
>AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical
protein Y37B11A.1 protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +1
Query: 1 QTSKLFDGKIYAK--GSPNSCVVDVKQSLEFELHMGYNNIECNVKQ----NGLGRYLN-D 159
+T + G +YA C++ K E+ M + +C + + +G G + N
Sbjct: 463 RTQRALQGVMYAHMYHDEPECMIR-KTDNSREIQMTFTEGKCGLVKTPTADGHGYHFNIT 521
Query: 160 VVIQHHDTIVTSSDLGLAVTC 222
V++Q H I+T +D GL ++C
Sbjct: 522 VILQFHPLIITRADQGLDMSC 542
>Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical
protein Y53C12B.6 protein.
Length = 382
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 1 QTSKLFDGKIYAKGSPN--SCVVD--VKQSLEFELHMGYNNIECNVKQNGL---GRYLND 159
+T F G ++ +GS + SC + + S G+++ K+ + G ++
Sbjct: 39 ETDSPFKGALFLRGSADKKSCKANFSAQPSQNISFEFGFDDCPSRRKRQIVAPRGMTMSS 98
Query: 160 V-VIQHHDTIVTSSDLGLAVTCQYDLTNKTV 249
V V+ +H +I+T D+ + C Y N V
Sbjct: 99 VLVVSYHGSIITHRDVAYQIDCFYREENSRV 129
>Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical
protein T22C8.7 protein.
Length = 609
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 160 VVIQHHDTIVTSSDLGLAVTCQYDLTNKTVAKK 258
V+IQHH VTS D + C Y T+ ++
Sbjct: 110 VIIQHHPLFVTSFDKAYRLNCIYRQQESTLQQR 142
>Z36753-16|CAA85338.2| 538|Caenorhabditis elegans Hypothetical
protein T09A5.3 protein.
Length = 538
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 548 KSTLSGKD--AAITFSTAFKFPSSEVVQFRALGDSLYAYLRNQCNVNGRSE 694
KS L G D I +T + FP+ + R +GD L+ R Q + RSE
Sbjct: 394 KSILRGTDNQQQIETNTFYPFPTETLSLNRKVGDGLFIQRRCQIHEEARSE 444
>AF187012-1|AAG35182.1| 538|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-7 protein.
Length = 538
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 548 KSTLSGKD--AAITFSTAFKFPSSEVVQFRALGDSLYAYLRNQCNVNGRSE 694
KS L G D I +T + FP+ + R +GD L+ R Q + RSE
Sbjct: 394 KSILRGTDNQQQIETNTFYPFPTETLSLNRKVGDGLFIQRRCQIHEEARSE 444
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 327 VAMRITDRSG-DDTIASAEVGDPLALRFEIMDPNSPFEIFVR 449
V M++ + G + + A++GD L LR+EIM + + FV+
Sbjct: 828 VLMQLLNGDGTEQPLVQAKLGDILELRWEIMAMDDELDFFVK 869
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 327 VAMRITDRSG-DDTIASAEVGDPLALRFEIMDPNSPFEIFVR 449
V M++ + G + + A++GD L LR+EIM + + FV+
Sbjct: 824 VLMQLLNGDGTEQPLVQAKLGDILELRWEIMAMDDELDFFVK 865
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,388,488
Number of Sequences: 27780
Number of extensions: 370925
Number of successful extensions: 1015
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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