Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30510
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336092-1|AAR24622.1|  183|Homo sapiens proliferation-inducing ...   103   9e-22
AK075227-1|BAC11486.1|  183|Homo sapiens protein ( Homo sapiens ...   103   9e-22
BC002583-1|AAH02583.1|  149|Homo sapiens TMEM85 protein protein.       86   1e-16

>AY336092-1|AAR24622.1|  183|Homo sapiens proliferation-inducing
           gene 17 protein.
          Length = 183

 Score =  103 bits (246), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = +3

Query: 255 ESSKDSDSNLLLIKKLWDVALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKAL 434
           ++S      +L+ K+ WD+ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL
Sbjct: 54  DTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQAL 113

Query: 435 FATQSTFKMVE-GTQAIGQKIVYCIG 509
            A  +TFKM+E  +Q   Q +VY IG
Sbjct: 114 MAISATFKMLESSSQRFLQGLVYLIG 139



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 500 LYRNIVNILLALYKCQSMGLLPTHSSDGWHLKSLQQDSEHIGRGVI 637
           L  N++ + LA+YKCQSMGLLPTH+SD        +  E  G G++
Sbjct: 137 LIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLL 182


>AK075227-1|BAC11486.1|  183|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90746 fis, clone PLACE1011516. ).
          Length = 183

 Score =  103 bits (246), Expect = 9e-22
 Identities = 49/86 (56%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
 Frame = +3

Query: 255 ESSKDSDSNLLLIKKLWDVALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKAL 434
           ++S      +L+ K+ WD+ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL
Sbjct: 54  DTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQAL 113

Query: 435 FATQSTFKMVE-GTQAIGQKIVYCIG 509
            A  +TFKM+E  +Q   Q +VY IG
Sbjct: 114 MAISATFKMLESSSQKFLQGLVYLIG 139



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = +2

Query: 500 LYRNIVNILLALYKCQSMGLLPTHSSDGWHLKSLQQDSEHIGRGVI 637
           L  N++ + LA+YKCQSMGLLPTH+SD        +  E  G G++
Sbjct: 137 LIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLL 182


>BC002583-1|AAH02583.1|  149|Homo sapiens TMEM85 protein protein.
          Length = 149

 Score = 86.2 bits (204), Expect = 1e-16
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = +3

Query: 255 ESSKDSDSNLLLIKKLWDVALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKAL 434
           ++S      +L+ K+ WD+ALGPLKQ+PMNLFIMYMAGN+ISIFP MMV M+  RP++AL
Sbjct: 54  DTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQAL 113

Query: 435 FA 440
            A
Sbjct: 114 MA 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,976,409
Number of Sequences: 237096
Number of extensions: 2526969
Number of successful extensions: 4054
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4044
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)