Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30509
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 121 5e-28
01_06_1721 - 39426957-39428005,39428812-39428839 121 5e-28
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 117 8e-27
08_01_0142 - 1121762-1122822,1123087-1123114 111 5e-25
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 99 4e-21
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 48 7e-06
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 32 0.50
06_01_0093 - 776567-777335,777449-777747 32 0.50
05_02_0156 + 7163756-7163834,7165447-7166225 32 0.50
11_03_0208 - 11682869-11683459 31 1.2
06_03_0810 - 24817268-24817350,24817547-24817697,24818441-248185... 31 1.2
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 30 1.5
02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630... 30 2.0
01_01_1045 - 8233895-8234632 30 2.0
06_02_0363 - 15172528-15173224,15174564-15174856 29 3.5
08_02_0574 - 18867623-18868033,18869751-18870209 29 4.7
08_02_0360 + 16196712-16197560,16198126-16198875 29 4.7
06_01_0707 + 5136210-5136584 29 4.7
05_04_0005 + 17063717-17063866,17065737-17065855,17066903-170672... 29 4.7
01_06_0080 + 26246857-26247459 29 4.7
12_02_0398 - 18586985-18587480,18587669-18587687,18588317-185885... 28 6.2
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 28 6.2
09_02_0121 + 4502628-4502696,4503727-4503829,4504205-4504328,450... 28 6.2
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 28 6.2
03_02_0119 - 5725588-5726688,5726793-5726894 28 6.2
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 28 6.2
02_05_0466 + 29278009-29278575 28 6.2
01_06_1241 + 35675596-35675918,35676459-35676804,35676864-35676866 28 6.2
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 28 6.2
07_01_1073 + 9566727-9566963,9566992-9567180 28 8.2
03_02_0983 - 12933082-12934884,12935669-12936487,12936754-129367... 28 8.2
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 28 8.2
01_06_0352 + 28638453-28639391,28639486-28640034,28640388-286411... 28 8.2
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 121 bits (292), Expect = 5e-28
Identities = 57/110 (51%), Positives = 73/110 (66%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DG P V +L++ G++PGIKVDKG + + G+E E TTQG DDL +RCA+Y + G FAKWR
Sbjct: 85 DGKPFVDVLKEGGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWR 144
Query: 435 CVLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHEL 584
VLKIG N P + Q A ICQ +VPIVEPE+L DG H++
Sbjct: 145 AVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDI 194
Score = 89.4 bits (212), Expect = 2e-18
Identities = 47/77 (61%), Positives = 55/77 (71%)
Frame = +1
Query: 25 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 204
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF + L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFCTPGAL-Q 67
Query: 205 NISGVILFHETLYQKAE 255
+SGVILF ETLYQK +
Sbjct: 68 YLSGVILFEETLYQKTK 84
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 121 bits (292), Expect = 5e-28
Identities = 58/110 (52%), Positives = 72/110 (65%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DG P V +L++ G++PGIKVDKG V + G+ E TTQG DDL +RCA+Y + G FAKWR
Sbjct: 85 DGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWR 144
Query: 435 CVLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHEL 584
VLKIG N P S Q A ICQ +VPIVEPE+L DG H++
Sbjct: 145 AVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSHDI 194
Score = 91.5 bits (217), Expect = 6e-19
Identities = 47/77 (61%), Positives = 57/77 (74%)
Frame = +1
Query: 25 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 204
++EL K A I P KGILAADESTGT+GKR I VEN EENRR R+LLF++ L +
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGAL-Q 67
Query: 205 NISGVILFHETLYQKAE 255
++SGVILF ETLYQK +
Sbjct: 68 HLSGVILFEETLYQKTK 84
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 117 bits (282), Expect = 8e-27
Identities = 68/141 (48%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = +3
Query: 258 GTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRC 437
GTP V +L+ G++PGIKVDKG V + G+ E TTQGLD L RCA+Y + G FAKWR
Sbjct: 277 GTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLGARCAKYYEAGARFAKWRA 336
Query: 438 VLKIGRNTPFVPSYPGKRQCSRPLAS---ICQSQRIVPIVEPEVLPDGEHELGPAPRKVT 608
VLKIG PS +Q + LA ICQ +VPIVEPE+L DG H++ VT
Sbjct: 337 VLKIG--AAGEPSELAVKQNAEGLARYALICQENGLVPIVEPEILTDGAHDIKTC-AAVT 393
Query: 609 EGRSGRRVTRR*NDQQVYLRG 671
E R V + ND +V L G
Sbjct: 394 E-RVLAAVYKSLNDHKVLLEG 413
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = +1
Query: 31 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENI 210
EL K A+ I P KGILAADESTGT+GKRL I VEN E NR+ R+LLF++ + +
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAF-QYL 260
Query: 211 SGVILFHETLYQ 246
SGVILF ETLYQ
Sbjct: 261 SGVILFEETLYQ 272
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 111 bits (267), Expect = 5e-25
Identities = 60/121 (49%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DGTP V +L G++ GIKVDKG V L G++ E TTQG D L +RC +Y G FAKWR
Sbjct: 85 DGTPFVDVLAAAGVLAGIKVDKGTVELAGTDRETTTQGHDGLGERCRRYYAAGARFAKWR 144
Query: 435 CVLKIGR--NTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVT 608
VL IGR + P + Q A ICQ +VPIVEPE+L DGEH + A +VT
Sbjct: 145 AVLSIGRASSRPSQLAVDANAQGLARYAIICQENGLVPIVEPEILVDGEHGI-EACAEVT 203
Query: 609 E 611
E
Sbjct: 204 E 204
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +1
Query: 25 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSE 204
++EL + A I P KGILAADESTGT+GKRL IGVEN EENRR R+LLF++ L +
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEENRRALRELLFTAPGAL-D 67
Query: 205 NISGVILFHETLYQ 246
+SGVILF ETLYQ
Sbjct: 68 CLSGVILFEETLYQ 81
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 98.7 bits (235), Expect = 4e-21
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DG +V +L ++ I+PGIKVDKG+VPL GS +E QGLD LA R A Y + G FAKWR
Sbjct: 118 DGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWR 177
Query: 435 CVLKIGRNTPFVPSYPGKRQCSRPL---ASICQSQRIVPIVEPEVLPDGEH 578
V+ I P PS ++ + L A+I Q +VPIVEPE+L DGEH
Sbjct: 178 TVVSI----PNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEH 224
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = +1
Query: 28 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSEN 207
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ YR LL ++ L +
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPG-LGQY 101
Query: 208 ISGVILFHETLYQ 246
ISG ILF ETLYQ
Sbjct: 102 ISGAILFEETLYQ 114
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 371
DG +V +L ++GI+PGI VDKG+VPL GS+ E GL
Sbjct: 225 DGRRIVDVLAEQGIVPGINVDKGLVPLAGSDPESLEDGL 263
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 109 GKRLQDIGVE-NTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQ 246
G+ +D+ E + NR+ YR LL ++ L + ISG ILF ETLYQ
Sbjct: 176 GRVERDVREEAGVDRNRQAYRTLLVTAPG-LGQYISGAILFEETLYQ 221
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 534 IVPIVEPEVLPDGEHEL 584
+VPIVEPE+L DGEH +
Sbjct: 263 LVPIVEPEILLDGEHRV 279
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 303 GIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCH 419
G+ ++ V GS+ EC + LD+L YKK+GC+
Sbjct: 782 GVSLEDVVKHFNGSKRECVVEMLDNLEGNFLVYKKNGCY 820
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 367 PWVVHSSSDPNSGTTPLSTLMPGMM 293
P+ HSSSDP S + PL +L+P M+
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLPAMV 91
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 296 HPRHQGRQGCRPAVRIGRRM-HHPGSGRPRPALRPVQEGRLPLRQ 427
HPRH+ R+ P R R + H G P PALRP RLP R+
Sbjct: 96 HPRHRRRRAAPPRPRRLRPVGHRKAPGDPLPALRP---RRLPGRR 137
>11_03_0208 - 11682869-11683459
Length = 196
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/81 (34%), Positives = 36/81 (44%)
Frame = +2
Query: 275 PAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRP 454
P + HH R + R+ CR + HH G GR PA RP +EG R+V + RP
Sbjct: 5 PLPDAEHHRRPRRRRSCRSHL----HSHHRG-GR-APARRP-REG-CQCRRVLHQVPPRP 56
Query: 455 QHPLRTKLSRKTPMFSPARFH 517
Q P T + T R H
Sbjct: 57 QAPPPTAVDDATGFLHWIREH 77
>06_03_0810 -
24817268-24817350,24817547-24817697,24818441-24818542,
24818722-24818802,24818900-24819020,24819284-24819401,
24819514-24819637,24819898-24819963,24820117-24820407,
24820455-24820592,24820967-24821116,24821240-24821410,
24821543-24821746,24821880-24822104,24822461-24822595,
24822995-24823096,24823586-24823882,24823979-24824167,
24824581-24824628,24824872-24825070,24825501-24825730,
24826373-24826568,24826695-24826882
Length = 1202
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/122 (24%), Positives = 42/122 (34%)
Frame = +2
Query: 179 SALTLCSPRTSLV*SCSTRPFTRRLRWNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMH 358
S++ L +P L R + RLR + A + R+GC GRR
Sbjct: 41 SSIALAAPANPLR-CIHRRAVSPRLRRRTEAVGAASAAIGSLGEEREGCLSCFPRGRRRG 99
Query: 359 HPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLRTKLSRKTPMFSPARFHLSEPTHR 538
PG R P P G L A+ R +H L + + SP + H
Sbjct: 100 RPGLARFAPCALPHTYGLSSLHSGLTGAKIRRRHVLHAAGPDEPHVASPTWSETALDKHY 159
Query: 539 AD 544
D
Sbjct: 160 VD 161
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 299 PRHQGRQGCRPAVRIGRRMHHPGSGRPR---PALRPVQEG 409
PRH R CRP R H P RPR P RP + G
Sbjct: 402 PRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLPRPTRTG 441
>02_05_1121 +
34262019-34262040,34262144-34262211,34262909-34263067,
34263146-34263313,34264125-34264278,34264845-34264924,
34265567-34265839,34265956-34266099,34266750-34266884,
34266994-34267092,34267530-34267586,34267673-34267877,
34268159-34268277,34268779-34268877,34268964-34269203
Length = 673
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 76 ILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKAE 255
ILA++E++ GK+ +D +++ + LL +LSE +S + H L QKA
Sbjct: 515 ILASNENSRRKGKKKKDHSKDSSRDTAFPSSCLLLQCYVLLSEGLSMRFIQHFDLLQKAR 574
Query: 256 M 258
+
Sbjct: 575 L 575
>01_01_1045 - 8233895-8234632
Length = 245
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 543 IVEPEVLPDGEHELGPAPRKVTEGRSGRRVTRR*NDQQ 656
++ P + DG P P GR GRRV RR +Q
Sbjct: 57 VMTPVAMEDGFGGSAPTPTPTPRGRGGRRVRRRMAQEQ 94
>06_02_0363 - 15172528-15173224,15174564-15174856
Length = 329
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +2
Query: 323 CRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPL 466
CRPA +G SGR P +E RLP R ALR RP+H L
Sbjct: 244 CRPATDLGASPPSL-SGRSAPTPPQARELRLPRRPGALR---RPRHGL 287
>08_02_0574 - 18867623-18868033,18869751-18870209
Length = 289
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 459 CCGRSSARNATWRSGSR--PSCTGRSAGRGRP 370
C G S+ +A + +R P+CTGRS+ G P
Sbjct: 90 CAGSSTTASAPTSTSTRAAPACTGRSSSTGLP 121
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 362 PGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLRTKLSRKTPMFSP 505
PGS +P P +RP P R ++ P+H RTK+ +P P
Sbjct: 302 PGSAKPEPGVRP-----NPSRPRSVARSLSPRHVTRTKIRGDSPARRP 344
>06_01_0707 + 5136210-5136584
Length = 124
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 564 PDGEHELGPAPRKVTEGRSGRRVTRR 641
P H LG R +G+ GRRV+RR
Sbjct: 90 PPPPHSLGAQRRSYLDGKGGRRVSRR 115
>05_04_0005 +
17063717-17063866,17065737-17065855,17066903-17067218,
17067579-17067722,17067909-17067926,17068853-17068954,
17069358-17069461,17069543-17069669,17069809-17069961,
17070261-17070361,17070538-17070739,17071245-17071469
Length = 586
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 522 DRWKRAGENIGVFLDSLVRRGCCGRSSARNATWRSGSRPSCTGRSAGRG 376
D + AG + +L R GC G A A WR G R + +++ RG
Sbjct: 17 DGFAEAGIDGEGWLQRRRRGGCSGGDGAVEARWRGGGRMWSSSQASTRG 65
>01_06_0080 + 26246857-26247459
Length = 200
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +2
Query: 245 RRLRWNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLR 424
RR R + PA +G + R G G R G GR P LRP++ GR
Sbjct: 116 RRRRMGTTSAPAAVDG-----EDRLGTTSVASGGVRGGGGGGGRGCPRLRPLRSGRWGRS 170
Query: 425 QVALRAE 445
++ R E
Sbjct: 171 RIRQRLE 177
>12_02_0398 -
18586985-18587480,18587669-18587687,18588317-18588544,
18589699-18589966
Length = 336
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -2
Query: 537 RCVGSDRWKRAGENIGVFLDSLVRRGCCGRSSARNATWRSGSRPSCTGRSAGRGRPDPG 361
R G +R G G F RR GR + +A G+ CTGR + RP PG
Sbjct: 45 RSGGDATGRRRGRVSGDF--PAKRRADRGRGGSCDAGRGGGAAGGCTGRDSDFTRPPPG 101
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 444 SARNATWRSGSRPSCTGRSAGRGRPDPGW 358
+A++A WR G RP+ T GR + + W
Sbjct: 27 TAKDARWRGGQRPAATPADEGRSQ-EAAW 54
>09_02_0121 +
4502628-4502696,4503727-4503829,4504205-4504328,
4505963-4506306,4506383-4506487,4507907-4508288,
4509173-4509437,4509936-4510094,4511150-4511201,
4511266-4511462,4512865-4513350,4513797-4514093
Length = 860
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 367 PWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSQP 248
P ++S P+ G+TPL+T PG +P + G+P QP
Sbjct: 602 PQGINSFVLPSVGSTPLATPTPGAVP-----NSVGIPQQP 636
>04_04_1193 +
31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 551 LDNRHD-ALALTDGSERARTLAFSWIAWYEGGVA 453
LD+ D A + +G E R L + WI+WY G A
Sbjct: 880 LDHIPDTASEVLEGLEPHRNLKYLWISWYNGAKA 913
>03_02_0119 - 5725588-5726688,5726793-5726894
Length = 400
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 429 TWRSGSRPSCTGRSAGRGRPDPGWCIRL 346
T + ++P TG G GRP PG C+ L
Sbjct: 364 TTTTPAKPPLTGPRGGDGRPLPGGCLTL 391
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 278 AGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGR-LPLRQVALRAEDRP 454
+GEE R G+Q R + GRR + + RP PA+RP +EGR + R ALR P
Sbjct: 14 SGEEAK--RKSGKQ--RGSGAKGRRRNGDRAFRP-PAMRPEEEGRGVATRPGALRERKPP 68
>02_05_0466 + 29278009-29278575
Length = 188
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 287 EGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 385
+GH +HQ Q + G HHP G P P
Sbjct: 129 KGHQQQHQQHQHQHHPQQHGMPQHHPQHGMPMP 161
>01_06_1241 + 35675596-35675918,35676459-35676804,35676864-35676866
Length = 223
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 507 LASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTEGRSG 623
L SI + + +P ++ DG HE G RK + R+G
Sbjct: 134 LGSIGGEDWYLGVAKPSIVEDGAHEQGGDGRKPVQSRAG 172
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 125 SCKRFPIVPVDSSAARIPFAG 63
+C + P+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 456 CGRSSARNATWRSGSRPSCTGRSAGRGRP 370
CG S + TW GSR R RG P
Sbjct: 83 CGSGSGEDGTWSGGSREDGQRRCRCRGSP 111
>03_02_0983 -
12933082-12934884,12935669-12936487,12936754-12936795,
12937116-12937244
Length = 930
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 424 AKWQPSFLYWAQRWARS-SRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRG 263
+K + + L+W W R +R W +D ++ L ++PG+ F S T+G
Sbjct: 416 SKTRSNDLFWEAVWPRLLARGWHSEKPNDVSTTKNCLVFIVPGIQRFSRSELTKG 470
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 407 GRLPLRQVALRAEDRPQHPLRTKLSRKTPMFSPAR 511
GRLPLR+ R+ DRP + ++ RK S +R
Sbjct: 569 GRLPLRRSISRSPDRPYRRIPSRSPRKNTRRSISR 603
>01_06_0352 +
28638453-28639391,28639486-28640034,28640388-28641195,
28641279-28641389,28641556-28641683
Length = 844
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -2
Query: 510 RAGENIGVFLDSLVRRGCCGR-SSARNATWRSGSRPSCTGRSAGRGRPDPGWCIRLPIRT 334
RAG S + G GR SS+ AT R R T R RGR GW + + T
Sbjct: 120 RAGHGGNGGSSSGIGGGGPGRGSSSSGATGRRRQRAMATNRGRDRGRGGRGWRVPRSVGT 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,103,470
Number of Sequences: 37544
Number of extensions: 548221
Number of successful extensions: 1957
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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