Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30509
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 146 2e-35
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 144 7e-35
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 132 3e-31
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 132 3e-31
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 132 3e-31
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 29 3.2
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.2
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.2
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 29 4.2
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 28 5.6
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 28 5.6
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.6
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 146 bits (353), Expect = 2e-35
Identities = 77/139 (55%), Positives = 90/139 (64%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWR
Sbjct: 90 DGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWR 149
Query: 435 CVLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTEG 614
CV KI TP V + ASICQ +VPIVEPE+LPDGEH L +K+TE
Sbjct: 150 CVHKISSTTPSVTALKEIASNLARYASICQQNGLVPIVEPEILPDGEHCLARG-QKITET 208
Query: 615 RSGRRVTRR*NDQQVYLRG 671
V N+ V+L G
Sbjct: 209 VLS-YVYHALNEHHVFLEG 226
Score = 116 bits (279), Expect = 2e-26
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +1
Query: 4 QYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 183
Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YRQLLF+
Sbjct: 6 QFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFT 65
Query: 184 SDAVLSENISGVILFHETLYQKAE 255
+ A L++ ISGVI+FHET YQK +
Sbjct: 66 AGADLNKYISGVIMFHETFYQKTD 89
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 144 bits (348), Expect = 7e-35
Identities = 77/140 (55%), Positives = 90/140 (64%), Gaps = 1/140 (0%)
Frame = +3
Query: 255 DGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWR 434
DG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG FAKWR
Sbjct: 90 DGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWR 149
Query: 435 CVLKIGRNTPFVPSYPG-KRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTE 611
CV KI TP V + ASICQ +VPIVEPE+LPDGEH L +K+TE
Sbjct: 150 CVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARG-QKITE 208
Query: 612 GRSGRRVTRR*NDQQVYLRG 671
V N+ V+L G
Sbjct: 209 TVLS-YVYHALNEHHVFLEG 227
Score = 116 bits (279), Expect = 2e-26
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +1
Query: 4 QYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 183
Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YRQLLF+
Sbjct: 6 QFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFT 65
Query: 184 SDAVLSENISGVILFHETLYQKAE 255
+ A L++ ISGVI+FHET YQK +
Sbjct: 66 AGADLNKYISGVIMFHETFYQKTD 89
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 132 bits (318), Expect = 3e-31
Identities = 74/138 (53%), Positives = 87/138 (63%)
Frame = +3
Query: 258 GTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRC 437
G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRC
Sbjct: 94 GEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRC 153
Query: 438 VLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTEGR 617
VL IG +TP ASICQ+ +VPIVEPEVL DGEH+L A +KVTE +
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA-QKVTE-Q 211
Query: 618 SGRRVTRR*NDQQVYLRG 671
V + D VYL G
Sbjct: 212 VLAFVYKALADHHVYLEG 229
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +1
Query: 13 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 192
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 193 VLSENISGVILFHETLYQKAE 255
L+++ISGVIL+ ET +Q +
Sbjct: 73 -LNQHISGVILYEETFHQSTD 92
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 132 bits (318), Expect = 3e-31
Identities = 74/138 (53%), Positives = 87/138 (63%)
Frame = +3
Query: 258 GTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRC 437
G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRC
Sbjct: 94 GEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRC 153
Query: 438 VLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTEGR 617
VL IG +TP ASICQ+ +VPIVEPEVL DGEH+L A +KVTE +
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA-QKVTE-Q 211
Query: 618 SGRRVTRR*NDQQVYLRG 671
V + D VYL G
Sbjct: 212 VLAFVYKALADHHVYLEG 229
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +1
Query: 13 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 192
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 193 VLSENISGVILFHETLYQKAE 255
L+++ISGVIL+ ET +Q +
Sbjct: 73 -LNQHISGVILYEETFHQSTD 92
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 132 bits (318), Expect = 3e-31
Identities = 74/138 (53%), Positives = 87/138 (63%)
Frame = +3
Query: 258 GTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRC 437
G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK GC FAKWRC
Sbjct: 94 GEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGGCGFAKWRC 153
Query: 438 VLKIGRNTPFVPSYPGKRQCSRPLASICQSQRIVPIVEPEVLPDGEHELGPAPRKVTEGR 617
VL IG +TP ASICQ+ +VPIVEPEVL DGEH+L A +KVTE +
Sbjct: 154 VLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA-QKVTE-Q 211
Query: 618 SGRRVTRR*NDQQVYLRG 671
V + D VYL G
Sbjct: 212 VLAFVYKALADHHVYLEG 229
Score = 88.6 bits (210), Expect = 4e-18
Identities = 45/81 (55%), Positives = 60/81 (74%)
Frame = +1
Query: 13 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 192
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 193 VLSENISGVILFHETLYQKAE 255
L+++ISGVIL+ ET +Q +
Sbjct: 73 -LNQHISGVILYEETFHQSTD 92
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 389 LRPVQEGRLPLRQVALRAEDRPQHPLRTKLSRK 487
LRP EG L L+ V+ R RP P+ T L+ K
Sbjct: 1131 LRPKLEGNLCLKDVSFRYPSRPIVPVLTNLNLK 1163
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 19 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 162
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 163 YRQLLFSSDA 192
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 19 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 162
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 163 YRQLLFSSDA 192
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +1
Query: 19 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 162
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 163 YRQLLFSSDA 192
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 453 GRSSARNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 346
GR N G RPS +G AG RP GWC+++
Sbjct: 253 GRPRPGNGGGGGGVRPSNSGCDAGWRRFNRPSGGWCVKV 291
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 323 CRPAVRIGRRMHHPGSGRP-----RPALRPVQEGRLPLRQVALRAEDRPQHPLRTKLSRK 487
C +V++GR + + R RPA RP Q RLPL + P P+ T SRK
Sbjct: 115 CDQSVKLGRSICCKDTRRGIVPNGRPA-RPTQ--RLPLTWSTVTPTAAPSQPIPTATSRK 171
Query: 488 TPMF 499
P +
Sbjct: 172 APWY 175
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 323 CRPAVRIGRRMHHPGSGRP-----RPALRPVQEGRLPLRQVALRAEDRPQHPLRTKLSRK 487
C +V++GR + + R RPA RP Q RLPL + P P+ T SRK
Sbjct: 111 CDQSVKLGRSICCKDTRRGIVPNGRPA-RPTQ--RLPLTWSTVTPTAAPSQPIPTATSRK 167
Query: 488 TPMF 499
P +
Sbjct: 168 APWY 171
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 255 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 359
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 435 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 346
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = +2
Query: 203 RTSLV*SCSTRPFTRRLRWNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPR 382
R L R T R+ ASG+PA + + P QG P GR P S + R
Sbjct: 425 RAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQGYFVPNPMNAQGRPGFQPQSAQIR 484
Query: 383 --PALRPVQEG---RLPLRQVALRAEDRPQHPLRTKLSR 484
P R Q + P Q + + + + P+RT R
Sbjct: 485 GPPGQRVFQNQMFMQYPFNQRQVYPQQQGRPPMRTNDGR 523
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = +2
Query: 203 RTSLV*SCSTRPFTRRLRWNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPR 382
R L R T R+ ASG+PA + + P QG P GR P S + R
Sbjct: 425 RAQLASQYMQRLATLRMGQQASGVPAMTQLYQPGQQGYFVPNPMNAQGRPGFQPQSAQIR 484
Query: 383 --PALRPVQEG---RLPLRQVALRAEDRPQHPLRTKLSR 484
P R Q + P Q + + + + P+RT R
Sbjct: 485 GPPGQRVFQNQMFMQYPFNQRQVYPQQQGRPPMRTNDGR 523
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 281 GEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 385
G GHH P H G P+ R G HH RP P
Sbjct: 392 GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,055,630
Number of Sequences: 27780
Number of extensions: 399204
Number of successful extensions: 1367
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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