Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30507
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         24   5.4  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         23   7.2  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         23   7.2  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         23   7.2  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   7.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.2  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 297 LNGKPIP--GTFPVVRFRLNTASRETRANMQHER 392
           ++G  IP  G FPV+ + + T        +QHER
Sbjct: 750 VDGSSIPPLGKFPVIHYEMYTGESFFAVLLQHER 783


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 297 LNGKPIP--GTFPVVRFRLNTASRETRANMQHER 392
           ++G  IP  G FPV+ + + T        +QHER
Sbjct: 751 VDGSSIPPLGKFPVIHYEMYTGESFFAVLLQHER 784


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 306 KPIPGTFPVVRFRLNTASRETRANMQHEREFSVW 407
           +P+ G     +F++  +SR   +N+  ERE S W
Sbjct: 613 EPLEGAI-TTKFKVQWSSRSDFSNVVGEREISEW 645


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 381 QHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQK 521
           Q+ RE      DL+  + D++  ++  +  T+I+ A+ +LD +++QK
Sbjct: 163 QYNREADRIAEDLATKMRDHA--QLLENVGTNIELAETLLDRASLQK 207


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 381 QHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQK 521
           Q+ RE      DL+  + D++  ++  +  T+I+ A+ +LD +++QK
Sbjct: 163 QYNREADRIAEDLANKMRDHA--QLLENVGTNIELAETLLDRASLQK 207


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 381 QHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQK 521
           Q+ RE      DL+  + D++  ++  +  T+I+ A+ +LD +++QK
Sbjct: 163 QYNREADRIAEDLANKMRDHA--QLLENVGTNIELAETLLDRASLQK 207


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 381 QHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQK 521
           Q+ RE      DL+  + D++  ++  +  T+I+ A+ +LD +++QK
Sbjct: 163 QYNREADRIAEDLANKMRDHA--QLLENVGTNIELAETLLDRASLQK 207


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 104 AIFGDFIRLLYFSNYILPL 48
           A+ G F  L +FSNY+LPL
Sbjct: 60  AVRGQFAPL-FFSNYMLPL 77


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 381  QHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQK 521
            Q+ RE      DL+  + D++  ++  +  T+I+ A+ +LD +++QK
Sbjct: 1302 QYNREADRIAEDLANKMRDHA--QLLENVGTNIELAETLLDRASLQK 1346


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 330 LEMCLVWVFHSICALRQLLLHPSENDKSI 244
           L++   WV  ++CA   L+L+ S +  S+
Sbjct: 66  LQVHFTWVLAALCAFLLLVLYISSSPSSL 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,568
Number of Sequences: 2352
Number of extensions: 16083
Number of successful extensions: 59
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)