BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30507 (720 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 63 2e-10 U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04 U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 41 8e-04 U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 41 8e-04 U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 41 8e-04 U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.002 Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 40 0.002 Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 40 0.002 AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 39 0.004 AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 39 0.004 AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.005 AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 38 0.007 Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.029 U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.089 Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.12 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.12 Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.16 Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 33 0.27 Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 32 0.36 Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 32 0.36 Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 31 0.83 Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 1.9 AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 29 3.3 U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 29 4.4 U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 29 4.4 AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 28 5.8 AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine re... 28 5.8 >Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical protein T07F10.3 protein. Length = 371 Score = 63.3 bits (147), Expect = 2e-10 Identities = 40/100 (40%), Positives = 52/100 (52%) Frame = +3 Query: 246 CFCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSP 425 CF F T +EA ++ LNG IPG F +RF L A+ N EF++ V + Sbjct: 111 CFIEFITFDEARQTLYDLNGNRIPG-FKDIRFNLCFANDSYNPN----SEFNLHVSSVPD 165 Query: 426 DVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRFG 545 D+ D LYR+F KY S + AK+ KG GFVRFG Sbjct: 166 DMADAELYRIF-DKYQSCRGAKMFRFVDGSSKGSGFVRFG 204 >U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical protein C18A3.5a protein. Length = 408 Score = 43.2 bits (97), Expect = 2e-04 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F F +A A+ +N + + V + + ++++ + R F V+VGDLS + Sbjct: 88 FVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTT--RHFHVFVGDLSSE 145 Query: 429 VDDYSLYRVFASKYTSIKTAKVILD-NSAIQKGMGFVRF 542 VD+ L F + + AKVI D N+ KG GFV + Sbjct: 146 VDNQKLREAF-QPFGDVSDAKVIRDTNTTKSKGYGFVSY 183 >U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical protein C18A3.5f protein. Length = 295 Score = 41.1 bits (92), Expect = 8e-04 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +3 Query: 363 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILD-NSAIQKGMGFVR 539 + ++ + R F V+VGDLS +VD+ L F + + AKVI D N+ KG GFV Sbjct: 11 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTNTTKSKGYGFVS 69 Query: 540 F 542 + Sbjct: 70 Y 70 >U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical protein C18A3.5e protein. Length = 305 Score = 41.1 bits (92), Expect = 8e-04 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +3 Query: 363 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILD-NSAIQKGMGFVR 539 + ++ + R F V+VGDLS +VD+ L F + + AKVI D N+ KG GFV Sbjct: 21 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTNTTKSKGYGFVS 79 Query: 540 F 542 + Sbjct: 80 Y 80 >U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical protein C18A3.5b protein. Length = 376 Score = 41.1 bits (92), Expect = 8e-04 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = +3 Query: 363 ETRANMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILD-NSAIQKGMGFVR 539 + ++ + R F V+VGDLS +VD+ L F + + AKVI D N+ KG GFV Sbjct: 92 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAF-QPFGDVSDAKVIRDTNTTKSKGYGFVS 150 Query: 540 F 542 + Sbjct: 151 Y 151 >U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-binding protein protein. Length = 646 Score = 39.9 bits (89), Expect = 0.002 Identities = 29/98 (29%), Positives = 48/98 (48%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F HF+T+E A +A+ K+NG + G V A R ++ +V+V + Sbjct: 164 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 223 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 + +L +VFA K+ +I + +V+ KG GFV F Sbjct: 224 YNKETLEKVFA-KFGNITSCEVMTVEGK-SKGFGFVAF 259 Score = 37.9 bits (84), Expect = 0.007 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 MQ + +++V +L VDD L + F S Y +I +AKV+ D + KG GFV F Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFES-YGNITSAKVMTDENGRSKGFGFVCF 364 Score = 29.9 bits (64), Expect = 1.9 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSA-IQKGMGFVRF 542 S++VGDL PDV++ L+ F S + + +V DN+ + G +V F Sbjct: 33 SLYVGDLHPDVNESILFEKF-SAAGPVLSIRVCRDNATRLSLGYAYVNF 80 >Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical protein F18H3.3b protein. Length = 566 Score = 39.5 bits (88), Expect = 0.002 Identities = 29/98 (29%), Positives = 43/98 (43%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F HF+T+ A A+ K+NG + V A R + +V+V + Sbjct: 189 FVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEH 248 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 +D L +F SK+ I +A V+ D KG GFV F Sbjct: 249 LDQEKLSAMF-SKFGEITSAVVMTDAQGKPKGFGFVAF 285 Score = 33.5 bits (73), Expect = 0.16 Identities = 18/55 (32%), Positives = 34/55 (61%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 +Q + +++V ++ D++D L F+S + +I +AKV++D + KG GFV F Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSS-FGTITSAKVMVDENGRSKGFGFVCF 390 Score = 30.3 bits (65), Expect = 1.4 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDN-SAIQKGMGFVRF 542 S+++GDL PDV + L+ F S + + +V DN S + G +V F Sbjct: 58 SLYIGDLHPDVSEAMLFEKF-SMAGPVLSIRVCRDNTSRLSLGYAYVNF 105 >Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical protein F18H3.3a protein. Length = 692 Score = 39.5 bits (88), Expect = 0.002 Identities = 29/98 (29%), Positives = 43/98 (43%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F HF+T+ A A+ K+NG + V A R + +V+V + Sbjct: 189 FVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEH 248 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 +D L +F SK+ I +A V+ D KG GFV F Sbjct: 249 LDQEKLSAMF-SKFGEITSAVVMTDAQGKPKGFGFVAF 285 Score = 33.5 bits (73), Expect = 0.16 Identities = 18/55 (32%), Positives = 34/55 (61%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 +Q + +++V ++ D++D L F+S + +I +AKV++D + KG GFV F Sbjct: 337 VQRYQGVNLYVKNIEEDLNDDGLRDHFSS-FGTITSAKVMVDENGRSKGFGFVCF 390 Score = 30.3 bits (65), Expect = 1.4 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDN-SAIQKGMGFVRF 542 S+++GDL PDV + L+ F S + + +V DN S + G +V F Sbjct: 58 SLYIGDLHPDVSEAMLFEKF-SMAGPVLSIRVCRDNTSRLSLGYAYVNF 105 >AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical protein Y106G6H.2b protein. Length = 583 Score = 38.7 bits (86), Expect = 0.004 Identities = 28/98 (28%), Positives = 48/98 (48%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F HF+T+E A +A+ K+NG + G V A R ++ +V+V + Sbjct: 101 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 160 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 + +L ++FA K+ +I + +V+ KG GFV F Sbjct: 161 YNKETLEKLFA-KFGNITSCEVMTVEGK-SKGFGFVAF 196 Score = 37.9 bits (84), Expect = 0.007 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 MQ + +++V +L VDD L + F S Y +I +AKV+ D + KG GFV F Sbjct: 248 MQKYQGVNLYVKNLDETVDDDGLKKQFES-YGNITSAKVMTDENGRSKGFGFVCF 301 >AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical protein Y106G6H.2a protein. Length = 646 Score = 38.7 bits (86), Expect = 0.004 Identities = 28/98 (28%), Positives = 48/98 (48%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F HF+T+E A +A+ K+NG + G V A R ++ +V+V + Sbjct: 164 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 223 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 + +L ++FA K+ +I + +V+ KG GFV F Sbjct: 224 YNKETLEKLFA-KFGNITSCEVMTVEGK-SKGFGFVAF 259 Score = 37.9 bits (84), Expect = 0.007 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 MQ + +++V +L VDD L + F S Y +I +AKV+ D + KG GFV F Sbjct: 311 MQKYQGVNLYVKNLDETVDDDGLKKQFES-YGNITSAKVMTDENGRSKGFGFVCF 364 Score = 29.9 bits (64), Expect = 1.9 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSA-IQKGMGFVRF 542 S++VGDL PDV++ L+ F S + + +V DN+ + G +V F Sbjct: 33 SLYVGDLHPDVNESILFEKF-SAAGPVLSIRVCRDNATRLSLGYAYVNF 80 >AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily assigned gene nameprotein 262 protein. Length = 302 Score = 38.3 bits (85), Expect = 0.005 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +3 Query: 387 EREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQ-KGMGFVRF 542 E +F V+ GDL +V D L + F KY S + AKV+ ++ + KG GFV F Sbjct: 200 ENDFRVFCGDLGNEVSDELLAKAF-RKYPSFQKAKVVRESRTNKSKGYGFVSF 251 >AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical protein Y106G6H.2c protein. Length = 586 Score = 37.9 bits (84), Expect = 0.007 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = +3 Query: 378 MQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQKGMGFVRF 542 MQ + +++V +L VDD L + F S Y +I +AKV+ D + KG GFV F Sbjct: 251 MQKYQGVNLYVKNLDETVDDDGLKKQFES-YGNITSAKVMTDENGRSKGFGFVCF 304 Score = 29.9 bits (64), Expect = 1.9 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSA-IQKGMGFVRF 542 S++VGDL PDV++ L+ F S + + +V DN+ + G +V F Sbjct: 33 SLYVGDLHPDVNESILFEKF-SAAGPVLSIRVCRDNATRLSLGYAYVNF 80 >Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical protein F56A8.6 protein. Length = 336 Score = 35.9 bits (79), Expect = 0.029 Identities = 15/51 (29%), Positives = 34/51 (66%) Frame = +1 Query: 109 QCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIF 261 Q +++G++ +++E I + F++ G L++K++ ++ TG+P GY F+ F Sbjct: 17 QRSVFVGNISYDVSEDTIRSIFSKAGN-VLSIKMVHDRETGKPKGYGFIEF 66 >U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical protein C30B5.4 protein. Length = 302 Score = 34.3 bits (75), Expect = 0.089 Identities = 14/60 (23%), Positives = 36/60 (60%) Frame = +1 Query: 118 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIFRRMKKQLTQCTN 297 +++G L ++E ++A F++ G+ + + ++R+K TG+ G+AF+ ++ + + N Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGE-VMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 33.9 bits (74), Expect = 0.12 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +1 Query: 76 KSLMKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFV 255 K+ M + +++G+L+P + E + F+ G K+MR+ +G G+AF+ Sbjct: 88 KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 147 Query: 256 IF 261 F Sbjct: 148 NF 149 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 33.9 bits (74), Expect = 0.12 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +1 Query: 76 KSLMKSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFV 255 K+ M + +++G+L+P + E + F+ G K+MR+ +G G+AF+ Sbjct: 98 KASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 157 Query: 256 IF 261 F Sbjct: 158 NF 159 >Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical protein F11A10.7 protein. Length = 394 Score = 33.5 bits (73), Expect = 0.16 Identities = 17/60 (28%), Positives = 34/60 (56%) Frame = +1 Query: 88 KSPKMAMQCQLWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIFRR 267 K + +++G+L +TE ++ F+ AV+++R+K TG+ G+AFV F++ Sbjct: 238 KKKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQ 297 >Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical protein F22B5.2 protein. Length = 256 Score = 32.7 bits (71), Expect = 0.27 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 130 SLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIF 261 +L M E + F ++G R + + + R+K TG P G+AFV F Sbjct: 182 NLPQEMNEDELRDLFGKIG-RVIRIFIARDKVTGLPKGFAFVTF 224 >Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical protein R10E4.2b protein. Length = 409 Score = 32.3 bits (70), Expect = 0.36 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQ-KGMGFVRF 542 ++++ L P+ +D L R SKY +I + K I+D + KG GFV F Sbjct: 108 NLYIRGLMPNTND-DLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 155 >Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical protein R10E4.2a protein. Length = 357 Score = 32.3 bits (70), Expect = 0.36 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 399 SVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILDNSAIQ-KGMGFVRF 542 ++++ L P+ +D L R SKY +I + K I+D + KG GFV F Sbjct: 82 NLYIRGLMPNTND-DLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 129 >Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical protein F35H8.5 protein. Length = 456 Score = 31.1 bits (67), Expect = 0.83 Identities = 16/50 (32%), Positives = 28/50 (56%) Frame = +1 Query: 133 LEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIFRRMKKQL 282 L MT+ + + F +G+ + K++R+K TG+ GY FV + R + L Sbjct: 49 LPQGMTQEEVRSLFTSIGEIE-SCKLVRDKVTGQSLGYGFVNYVREEDAL 97 Score = 28.7 bits (61), Expect = 4.4 Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRFRLNTASRETRANMQHEREFSVWVGDLSPD 428 F ++ +E+A+ A+ NG + V + R + + +++V + Sbjct: 87 FVNYVREEDALRAVSSFNGLRLQNKTIKVSY--------ARPSNDQIKGSNLYVSGIPKS 138 Query: 429 VDDYSLYRVFASKYTSIKTAKVILDN-SAIQKGMGFVRF 542 + + L +F + I T++++ DN + + KG+GFVRF Sbjct: 139 MTLHELESIFRP-FGQIITSRILSDNVTGLSKGVGFVRF 176 >Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical protein W02B12.2 protein. Length = 281 Score = 29.9 bits (64), Expect = 1.9 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 249 FCHFQTDEEAIDAMHKLNGKPIPGTFPVVRF 341 F FQ +A DA+H LNGK + G ++ F Sbjct: 39 FVDFQDQRDADDAVHDLNGKELCGERVILEF 69 >AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical protein Y46G5A.13 protein. Length = 434 Score = 29.1 bits (62), Expect = 3.3 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +1 Query: 118 LWMGSLEPNMTESFIMAAFNRLGQRPLAVKVMRNKFTGEPAGYAFVIF 261 L++ +L+P +T+ F+ FN++G AV + F G YAFV F Sbjct: 42 LFVANLDPAITDEFLATLFNQIG----AVMKAKIIFEGLNDPYAFVEF 85 >U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein R08E3.1b protein. Length = 1465 Score = 28.7 bits (61), Expect = 4.4 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 571 PYAMNGYCGLRTKTSPKFAQLYLNLKSNLTTAQSTFYNFQTGQPYTS 711 P A+NG + L+ +L+ + T Q F FQTGQ Y S Sbjct: 732 PIAINGAKDFENYLTYYVVPLFQSLQYQVNTPQRVFNVFQTGQFYNS 778 >U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein R08E3.1a protein. Length = 1512 Score = 28.7 bits (61), Expect = 4.4 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +1 Query: 571 PYAMNGYCGLRTKTSPKFAQLYLNLKSNLTTAQSTFYNFQTGQPYTS 711 P A+NG + L+ +L+ + T Q F FQTGQ Y S Sbjct: 732 PIAINGAKDFENYLTYYVVPLFQSLQYQVNTPQRVFNVFQTGQFYNS 778 >AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical protein Y116A8C.34 protein. Length = 331 Score = 28.3 bits (60), Expect = 5.8 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Frame = +3 Query: 375 NMQHEREFSVWVGDLSPDVDDYSLYRVFASKYTSIKTAKVILD-NSAIQKGMGFVRF 542 N H R+ +++VG + DV + L F + + + +D S +G GFV F Sbjct: 4 NFPHNRKRTLYVGGFTEDVTEKVLMAAFI-PFGDVVAISIPMDYESGKHRGFGFVEF 59 >AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine receptor, class bc (class b-like) protein 33 protein. Length = 296 Score = 28.3 bits (60), Expect = 5.8 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 99 FW*FHKTFIFFKLYIATLLALIPIF 25 FW HK+ IFF + + ++L I +F Sbjct: 172 FWTIHKSIIFFSILVFSILISIKLF 196 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,466,609 Number of Sequences: 27780 Number of extensions: 376399 Number of successful extensions: 923 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 919 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1687292480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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