Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30506
(597 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 150 7e-37
03_01_0547 + 4093196-4093657,4094267-4095148 150 7e-37
03_01_0544 + 4082528-4082989,4083585-4084466 150 7e-37
03_01_0543 + 4076981-4077442,4078145-4079026 150 7e-37
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 100 2e-21
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 99 2e-21
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 93 2e-19
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 86 2e-17
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 86 2e-17
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 47 1e-05
02_04_0462 + 23131433-23132836 46 2e-05
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 31 0.70
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 30 1.6
09_06_0237 + 21788886-21789965 29 2.8
01_01_0016 - 88825-90411 29 2.8
05_04_0116 + 18131510-18133192 29 3.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 4.9
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 4.9
03_04_0206 - 18493178-18495310 28 4.9
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 28 6.5
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 6.5
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 27 8.6
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 27 8.6
02_05_0081 + 25671014-25671200,25672490-25672796,25673508-256736... 27 8.6
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 150 bits (364), Expect = 7e-37
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 101 bits (241), Expect = 6e-22
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 150 bits (364), Expect = 7e-37
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 101 bits (241), Expect = 6e-22
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 150 bits (364), Expect = 7e-37
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 101 bits (241), Expect = 6e-22
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIK 100
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 150 bits (364), Expect = 7e-37
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+
Sbjct: 158 TTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 196
Score = 101 bits (241), Expect = 6e-22
Identities = 47/53 (88%), Positives = 48/53 (90%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY T+IDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIK 100
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Frame = +2
Query: 254 DMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 433
+MI+G SQAD VL+++A GEFE G K GQTREH LLA TLGV +LIV +NKMD
Sbjct: 92 NMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTV 151
Query: 434 PYSEPRFEEIKKEVSSYIKKIGYN-PLAVAFVPISG 538
+S+ R++EI+ ++ +++ GYN V F+PISG
Sbjct: 152 KWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISG 187
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +1
Query: 4 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 156
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/96 (50%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = +2
Query: 254 DMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEP 433
+MI+G SQAD VL+++A GEFE G + GQTREH LLA TLGV +L+V +NKMD +
Sbjct: 47 NMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTV 106
Query: 434 PYSEPRFEEIKKEVSSYIKKIGYN-PLAVAFVPISG 538
+S+ R++EI+ ++ ++K GYN V F+PISG
Sbjct: 107 GWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISG 142
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G T+++ FET TI+DAPGH+ ++
Sbjct: 16 GKTVEVGRAHFETETTRFTILDAPGHKSYV 45
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKM 418
F +MI+G +Q+D A+L++ A G FEAG+ NG QT+EH+ L + GV LIV VNKM
Sbjct: 325 FVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKM 384
Query: 419 DSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPIS 535
DS E YS+ RF IK ++ ++++ GY AVA+VPIS
Sbjct: 385 DSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPIS 421
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
GIT+ + + F+T Y+V ++D+PGH+DF+
Sbjct: 297 GITMTVGVAYFDTKNYHVVLLDSPGHKDFV 326
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 100 MGKGSFKYAWVLDKLKAERE 159
+GKGSF YAW +D+ ERE
Sbjct: 276 IGKGSFAYAWAMDESADERE 295
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 85.8 bits (203), Expect = 2e-17
Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQLIVGV 409
F +MI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QLIV V
Sbjct: 338 FVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAV 397
Query: 410 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPIS 535
NKMD+ YS+ RFE IK ++ S+++ + +V ++P+S
Sbjct: 398 NKMDAI--GYSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLS 437
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ERE
Sbjct: 256 VDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 310 GVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 85.8 bits (203), Expect = 2e-17
Identities = 46/102 (45%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKN-----GQTREHALLAFTLGVKQLIVGV 409
F +MI+G +QAD A+L+V A TG FEAG+ GQT+EHA L + GV+QLIV V
Sbjct: 338 FVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAV 397
Query: 410 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPIS 535
NKMD+ YS+ RFE IK ++ S+++ + +V ++P+S
Sbjct: 398 NKMDAI--GYSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLS 437
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+ ERE
Sbjct: 256 VDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G+T+ +A+ ET KY V ++D+PGH+DF+
Sbjct: 310 GVTMTVAVAYLETKKYRVVLLDSPGHKDFV 339
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 397
H C + ++MITG +Q D +L+V+A G QT+EH LLA +GV L
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 398 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 490
+ +NK+D+ + P E +E+ S+ K
Sbjct: 187 VCFLNKVDAVDDPELLELVEMELRELLSFYK 217
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI A ++ET+K + +D PGH D++K
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVK 145
>02_04_0462 + 23131433-23132836
Length = 467
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 397
H C + ++MITG +Q D A+L+V+ G QT+EH LLA +GV ++
Sbjct: 137 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPKI 189
Query: 398 IVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 484
+V +NK D + E E+++ +SSY
Sbjct: 190 VVFLNKKDQVDDEELLQLVELEVRELLSSY 219
Score = 33.9 bits (74), Expect = 0.099
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI+ A ++ET + +D PGH D++K
Sbjct: 118 GITINTATVEYETETRHYAHVDCPGHADYVK 148
>06_03_1457 -
30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -3
Query: 271 GSCDHVLMKSLCPGASMMVT*YLLVSNFQRAISIVIPTHAQPLVCPIPKHI*RILYP 101
G+C H L S CPG + +T +V+ FQRA+ + Q +C K I + P
Sbjct: 285 GACLHALHSS-CPGYIVAITASDIVNVFQRAVHTSRSSELQVAMCNAYKRIVELCSP 340
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDF 248
GITI A + Y V IID PGH DF
Sbjct: 121 GITIQSAATYCTWNGYQVNIIDTPGHVDF 149
>09_06_0237 + 21788886-21789965
Length = 359
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 230 SWTQRFHQDMITGTSQADCAVLIVAAGTGEF 322
SW + F ++++ SQ DC +V G G F
Sbjct: 265 SWNETFPRELVAAHSQYDCPGNLVYVGDGRF 295
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 403 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 284
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>05_04_0116 + 18131510-18133192
Length = 560
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -1
Query: 459 SSNLGSLYGGSVE-SILFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPA---ATMS 292
+S G GGS+ S+ P S T V S P + PA+ +P PA ATM+
Sbjct: 66 ASGSGEGQGGSMSLSLQLRPLGSTPTAAVAVSVPPMAAAPMMAGPAAAAPAPAPPLATMA 125
Query: 291 TAQSA 277
AQ+A
Sbjct: 126 VAQNA 130
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 469 LLDFLKSGLTVWWFSGIHFVY 407
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 163 PTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 65
PT PL+ P P + +L PF P+R+ WY
Sbjct: 41 PTTRAPLL-PSPPRLPPLLVPFAAVPARSFSWY 72
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 407 VNKMDSTEPPYSEPRFEEIKKEV 475
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -3
Query: 532 NGHESDSQWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 407
NGH + +V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 101 WVKDPSNMLGYWTN*RLSVSRYHNR 175
W+ PS+ +GYW N +S + N+
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQ 900
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 195 ETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LPVPVNSKLVSLRTV 347
+ Y + +ID PGH DF S E R +A C L V ++ V +T+
Sbjct: 130 DAPSYLLNLIDTPGHVDF----SYEVSRSLAACQGALLVVDAAQGVQAQTI 176
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 194 ELPESNIDCDTDSRSAFSLSNTQAYLKDPLP-ISWASFSN 78
E+ +S ID D+D T+ PLP + WA+F +
Sbjct: 305 EISKSLIDFDSDFEPHQGFGQTEVQKSSPLPDVGWATFDD 344
>02_05_0081 +
25671014-25671200,25672490-25672796,25673508-25673637,
25677283-25677477
Length = 272
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 498 ATTHWLSLSCPFLDGHGDNMLGAFQPK 578
+TT WLSL F DG GD +G+ Q K
Sbjct: 183 STTFWLSLLVEFEDGDGD--IGSMQLK 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,053,736
Number of Sequences: 37544
Number of extensions: 392723
Number of successful extensions: 1142
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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