Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30506
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 167 5e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 167 5e-42
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 116 1e-26
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 116 1e-26
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 109 2e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 102 2e-22
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 100 9e-22
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 100 9e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 53 2e-07
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 53 2e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 47 1e-05
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 47 1e-05
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 47 1e-05
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.12
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 30 1.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 30 1.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 30 1.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 30 1.1
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.9
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.9
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 28 5.8
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 167 bits (406), Expect = 5e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
TEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 116 bits (279), Expect = 1e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 167 bits (406), Expect = 5e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
TEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 116 bits (279), Expect = 1e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 116 bits (279), Expect = 1e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/75 (68%), Positives = 58/75 (77%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSP 154
Query: 425 TEPPYSEPRFEEIKK 469
T P S R + I++
Sbjct: 155 TRSPDSSRRSDTIQR 169
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIK 100
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 116 bits (279), Expect = 1e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 79.0 bits (186), Expect(2) = 3e-20
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +2
Query: 395 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 162
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIK 100
Score = 36.7 bits (81), Expect(2) = 3e-20
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVA 304
F ++MITGTSQADCAVL+VA
Sbjct: 98 FIKNMITGTSQADCAVLVVA 117
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 109 bits (261), Expect = 2e-24
Identities = 49/52 (94%), Positives = 50/52 (96%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 156
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 102 bits (244), Expect = 2e-22
Identities = 46/99 (46%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F +MI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD
Sbjct: 200 FVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDD 259
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLA-VAFVPISG 538
+ E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 260 PTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE
Sbjct: 118 VDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Score = 37.1 bits (82), Expect = 0.009
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G T+++ FET K + TI+DAPGH+ F+
Sbjct: 172 GKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 100 bits (239), Expect = 9e-22
Identities = 52/100 (52%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F +MITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 261 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 320
Query: 425 TEPPYSEPRFEEIKKEVSSYI-KKIGYNPLAVAFVPISGW 541
+ +S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 321 VD--WSQDRFDEIKNNLSVFLTRQAGFS--KPKFVPVSGF 356
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE
Sbjct: 179 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G+T+DI FETS + ++DAPGH+DFI
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFI 262
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 100 bits (239), Expect = 9e-22
Identities = 52/100 (52%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F +MITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 279 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 338
Query: 425 TEPPYSEPRFEEIKKEVSSYI-KKIGYNPLAVAFVPISGW 541
+ +S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 339 VD--WSQDRFDEIKNNLSVFLTRQAGFS--KPKFVPVSGF 374
Score = 67.3 bits (157), Expect = 8e-12
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE
Sbjct: 197 VDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFI 251
G+T+DI FETS + ++DAPGH+DFI
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFI 280
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 397
H C F ++MI GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 398 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 505
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI++A +E+ + D PGH DFIK
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 397
H C F ++MI GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 398 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 505
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI++A +E+ + D PGH DFIK
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIK 123
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 391
H C + ++MITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 116 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 168
Query: 392 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 502
++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 169 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI+ ++ET+K + ID PGH D+IK
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIK 127
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 391
H C + ++MITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 392 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 502
++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI+ ++ET+K + ID PGH D+IK
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 HH*CSWTQRFHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 391
H C + ++MITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 392 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 502
++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITI+ ++ET+K + ID PGH D+IK
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIK 128
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 414 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 286
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 477 PHTSRRLATTHWLSLSCPFLDGHGDNM--------LGAFQPKLPWFKG 596
PH SR T + L+ SCPFLD ++ + A P+ P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 477 PHTSRRLATTHWLSLSCPFLDGHGDNM--------LGAFQPKLPWFKG 596
PH SR T + L+ SCPFLD ++ + A P+ P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 477 PHTSRRLATTHWLSLSCPFLDGHGDNM--------LGAFQPKLPWFKG 596
PH SR T + L+ SCPFLD ++ + A P+ P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Frame = +3
Query: 477 PHTSRRLATTHWLSLSCPFLDGHGDNM--------LGAFQPKLPWFKG 596
PH SR T + L+ SCPFLD ++ + A P+ P FKG
Sbjct: 158 PHLSRNSFTANALNCSCPFLDAANEDSEIENEDVDMLANTPQFPLFKG 205
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIKT*SQEPLRLIALCSS*LPVPVNSKLVSLR 341
GIT+ Y + +ID PGH DF S E R +A+C L + ++ V +
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDF----SAEVSRSLAVCDGILLLVAANQGVQAQ 142
Query: 342 TV 347
T+
Sbjct: 143 TI 144
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 257 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 436
++ ++ D A++I+ + AGI QT EH LLA ++I+ +NK D E
Sbjct: 89 VLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE-- 139
Query: 437 YSEPRFEEIKKEVSSYIKKIG 499
+ + E K+V +K +G
Sbjct: 140 --KSKISESAKKVRKGLKSMG 158
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDF 248
GIT+ A + + + +ID PGH DF
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,829,740
Number of Sequences: 27780
Number of extensions: 317289
Number of successful extensions: 929
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -