Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30506
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 195 2e-52
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 195 2e-52
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 195 2e-52
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 185 3e-49
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 6.9
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 9.2
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 195 bits (476), Expect = 2e-52
Identities = 94/99 (94%), Positives = 96/99 (96%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 25 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 84
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
TEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPISGW
Sbjct: 85 TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 123
Score = 63.3 bits (147), Expect = 2e-12
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 174 DIALWKFETSKYYVTIIDAPGHRDFIK 254
DIALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIK 27
Score = 30.3 bits (65), Expect = 0.015
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 528 PFLDGHGDNMLGAFQPKLPWFKG 596
P HGDNML K+PWFKG
Sbjct: 119 PISGWHGDNMLEV-SSKMPWFKG 140
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 195 bits (476), Expect = 2e-52
Identities = 94/99 (94%), Positives = 96/99 (96%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 41 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 100
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
TEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPISGW
Sbjct: 101 TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 139
Score = 70.9 bits (166), Expect = 9e-15
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 43
Score = 30.3 bits (65), Expect = 0.015
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 528 PFLDGHGDNMLGAFQPKLPWFKG 596
P HGDNML K+PWFKG
Sbjct: 135 PISGWHGDNMLEV-SSKMPWFKG 156
Score = 27.5 bits (58), Expect = 0.11
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 127 WVLDKLKAERE 159
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 195 bits (476), Expect = 2e-52
Identities = 94/99 (94%), Positives = 96/99 (96%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
TEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPISGW
Sbjct: 158 TEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 196
Score = 116 bits (279), Expect = 2e-28
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 70.9 bits (166), Expect = 9e-15
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFETSKYYVTIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 100
Score = 30.3 bits (65), Expect = 0.015
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 528 PFLDGHGDNMLGAFQPKLPWFKG 596
P HGDNML K+PWFKG
Sbjct: 192 PISGWHGDNMLEV-SSKMPWFKG 213
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 185 bits (451), Expect = 3e-49
Identities = 89/99 (89%), Positives = 93/99 (93%)
Frame = +2
Query: 245 FHQDMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 424
F ++MITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDM 157
Query: 425 TEPPYSEPRFEEIKKEVSSYIKKIGYNPLAVAFVPISGW 541
T+PPYSE RFEEIKKEVSSYIKKIGYN +VAFVPISGW
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGW 196
Score = 116 bits (279), Expect = 2e-28
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +1
Query: 1 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 159
VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 16 VDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 69.7 bits (163), Expect = 2e-14
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 162 GITIDIALWKFETSKYYVTIIDAPGHRDFIK 254
GITIDIALWKFET+KYYVTIIDAPGHRDFIK
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIK 100
Score = 30.7 bits (66), Expect = 0.011
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 528 PFLDGHGDNMLGAFQPKLPWFKG 596
P HGDNML PK PW+KG
Sbjct: 192 PISGWHGDNMLEP-SPKTPWYKG 213
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 213 VTIIDAPGHRDFI 251
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 417 WIPLNHHTVSPDLRKSRRKY 476
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 358 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 272
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 58 DKRTIEKFEKEAQEMG 105
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 469 LLDFLKSGLTVWWFSGIH 416
L F++SG+T W S I+
Sbjct: 56 LSHFIESGITAIWLSPIN 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,720
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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