Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30504
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione S-tran...    25   2.8  
AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione S-tran...    25   2.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.5  

>AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione
           S-transferase D1-3 protein.
          Length = 218

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 301 WQH*EPQLDPVHEFLRCDFSTAERVYVND*REQIIQRQIAFF 176
           W+    Q+  V ++   D + AER+Y  D R + +  Q  FF
Sbjct: 64  WESRAIQIYLVEKYCAHDPALAERLYPGDPRRRAVVHQRLFF 105


>AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 301 WQH*EPQLDPVHEFLRCDFSTAERVYVND*REQIIQRQIAFF 176
           W+    Q+  V ++   D + AER+Y  D R + +  Q  FF
Sbjct: 64  WESRAIQIYLVEKYCAHDPALAERLYPGDPRRRAVVHQRLFF 105


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 474 ARIPRPVTAASRDLVDTDRPELTDLRHRNEGIKDLLRSG 590
           A IP+ ++A        +  EL+DL H N  +   L SG
Sbjct: 380 AEIPKHISALGAKQSKMEVMELSDLHHPNCKMNRKLNSG 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,757
Number of Sequences: 2352
Number of extensions: 12482
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)