Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30504
(662 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032453-1|AAH32453.1| 684|Homo sapiens sec1 family domain cont... 59 1e-08
BC021137-1|AAH21137.2| 684|Homo sapiens sec1 family domain cont... 59 1e-08
BC012458-1|AAH12458.1| 650|Homo sapiens SCFD2 protein protein. 59 1e-08
AY299407-1|AAP57259.1| 684|Homo sapiens syntaxin binding protei... 59 1e-08
AK096833-1|BAC04872.1| 639|Homo sapiens protein ( Homo sapiens ... 59 1e-08
BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec... 35 0.23
EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein. 33 0.69
BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec... 33 0.69
AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec... 33 0.69
AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens ... 33 0.69
AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein. 31 2.8
AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein. 31 2.8
AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350 ... 31 2.8
AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring prot... 31 2.8
AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein. 31 2.8
AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein. 31 2.8
Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61) p... 31 3.7
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 31 3.7
AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and Golgi-l... 31 3.7
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 31 3.7
AL591507-1|CAI39952.1| 983|Homo sapiens RP3-398G3.1 protein. 31 4.9
AL049548-1|CAI42743.1| 983|Homo sapiens RP3-398G3.1 protein. 31 4.9
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 31 4.9
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 31 4.9
BC010707-1|AAH10707.1| 334|Homo sapiens C17orf85 protein protein. 30 6.4
AJ277841-1|CAB91001.1| 340|Homo sapiens ELG protein protein. 30 6.4
>BC032453-1|AAH32453.1| 684|Homo sapiens sec1 family domain
containing 2 protein.
Length = 684
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 NHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIK---S 172
NH G+LQL LA QTLK P+ A+ + + E+ +LQ++G S S VL Q+ +IK
Sbjct: 402 NHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSV-VLNQLLPMIKPVTQ 460
Query: 173 RKERNLPLDNLLALIIHIYSLGGTEVTSQK 262
R + + LL L+I+IYS+ G E+T K
Sbjct: 461 RTNEDYSPEELLILLIYIYSVTG-ELTVDK 489
Score = 32.3 bits (70), Expect = 1.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 510 DLVDTDRPELTDLRHRNEGIKDLLRSGLNILTRQEISHFGKHP 638
++ +RP+ D+ H + G+ DLL++G ++ + H +P
Sbjct: 582 EIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP 624
>BC021137-1|AAH21137.2| 684|Homo sapiens sec1 family domain
containing 2 protein.
Length = 684
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 NHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIK---S 172
NH G+LQL LA QTLK P+ A+ + + E+ +LQ++G S S VL Q+ +IK
Sbjct: 402 NHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSV-VLNQLLPMIKPVTQ 460
Query: 173 RKERNLPLDNLLALIIHIYSLGGTEVTSQK 262
R + + LL L+I+IYS+ G E+T K
Sbjct: 461 RTNEDYSPEELLILLIYIYSVTG-ELTVDK 489
Score = 32.3 bits (70), Expect = 1.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 510 DLVDTDRPELTDLRHRNEGIKDLLRSGLNILTRQEISHFGKHP 638
++ +RP+ D+ H + G+ DLL++G ++ + H +P
Sbjct: 582 EIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP 624
>BC012458-1|AAH12458.1| 650|Homo sapiens SCFD2 protein protein.
Length = 650
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 NHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIK---S 172
NH G+LQL LA QTLK P+ A+ + + E+ +LQ++G S S VL Q+ +IK
Sbjct: 368 NHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSV-VLNQLLPMIKPVTQ 426
Query: 173 RKERNLPLDNLLALIIHIYSLGGTEVTSQK 262
R + + LL L+I+IYS+ G E+T K
Sbjct: 427 RTNEDYSPEELLILLIYIYSVTG-ELTVDK 455
Score = 32.3 bits (70), Expect = 1.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 510 DLVDTDRPELTDLRHRNEGIKDLLRSGLNILTRQEISHFGKHP 638
++ +RP+ D+ H + G+ DLL++G ++ + H +P
Sbjct: 548 EIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP 590
>AY299407-1|AAP57259.1| 684|Homo sapiens syntaxin binding protein
1-like 1 protein.
Length = 684
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 NHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIK---S 172
NH G+LQL LA QTLK P+ A+ + + E+ +LQ++G S S VL Q+ +IK
Sbjct: 402 NHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSV-VLNQLLPMIKPVTQ 460
Query: 173 RKERNLPLDNLLALIIHIYSLGGTEVTSQK 262
R + + LL L+I+IYS+ G E+T K
Sbjct: 461 RTNEDYSPEELLILLIYIYSVTG-ELTVDK 489
Score = 32.3 bits (70), Expect = 1.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 510 DLVDTDRPELTDLRHRNEGIKDLLRSGLNILTRQEISHFGKHP 638
++ +RP+ D+ H + G+ DLL++G ++ + H +P
Sbjct: 582 EIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYP 624
>AK096833-1|BAC04872.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ39514 fis, clone PUAEN1000085. ).
Length = 639
Score = 59.3 bits (137), Expect = 1e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +2
Query: 2 NHLGILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIK---S 172
NH G+LQL LA QTLK P+ A+ + + E+ +LQ++G S S VL Q+ +IK
Sbjct: 402 NHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSV-VLNQLLPMIKPVTQ 460
Query: 173 RKERNLPLDNLLALIIHIYSLGGTEVTSQK 262
R + + LL L+I+IYS+ G E+T K
Sbjct: 461 RTNEDYSPEELLILLIYIYSVTG-ELTVDK 489
>BC110654-1|AAI10655.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 35.1 bits (77), Expect = 0.23
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 29 LAVVQTLKSPRRAQLELLAS--LEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDN 202
L V+Q+LK P + ++L LE L+ LGA+R M L +++ ER + L+N
Sbjct: 60 LQVIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 203 LLA 211
LLA
Sbjct: 120 LLA 122
>EF011613-1|ABK41103.1| 513|Homo sapiens CDW3/SMU1 protein.
Length = 513
Score = 33.5 bits (73), Expect = 0.69
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 29 LAVVQTLKSPRRAQLELLAS--LEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDN 202
L +Q+LK P + ++L LE L+ LGA+R M L +++ ER + L+N
Sbjct: 60 LQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 203 LLA 211
LLA
Sbjct: 120 LLA 122
>BC002876-1|AAH02876.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 33.5 bits (73), Expect = 0.69
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 29 LAVVQTLKSPRRAQLELLAS--LEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDN 202
L +Q+LK P + ++L LE L+ LGA+R M L +++ ER + L+N
Sbjct: 60 LQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 203 LLA 211
LLA
Sbjct: 120 LLA 122
>AL162590-6|CAI15554.1| 513|Homo sapiens smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans) protein.
Length = 513
Score = 33.5 bits (73), Expect = 0.69
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 29 LAVVQTLKSPRRAQLELLAS--LEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDN 202
L +Q+LK P + ++L LE L+ LGA+R M L +++ ER + L+N
Sbjct: 60 LQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 203 LLA 211
LLA
Sbjct: 120 LLA 122
>AK001667-1|BAA91822.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ10805 fis, clone NT2RP4000839, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 513
Score = 33.5 bits (73), Expect = 0.69
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 29 LAVVQTLKSPRRAQLELLAS--LEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLPLDN 202
L +Q+LK P + ++L LE L+ LGA+R M L +++ ER + L+N
Sbjct: 60 LQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 203 LLA 211
LLA
Sbjct: 120 LLA 122
>AJ131693-1|CAB40713.1| 3908|Homo sapiens AKAP450 protein protein.
Length = 3908
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 3210 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 3268
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 3269 QLLNESQQKIESQRML 3284
>AJ010770-1|CAA09361.1| 3911|Homo sapiens Hyperion protein protein.
Length = 3911
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 3213 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 3271
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 3272 QLLNESQQKIESQRML 3287
>AF091711-1|AAD39719.1| 1773|Homo sapiens splice variant AKAP350
protein.
Length = 1773
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 1057 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 1115
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 1116 QLLNESQQKIESQRML 1131
>AF083037-1|AAD22767.1| 3595|Homo sapiens A-kinase anchoring protein
AKAP350 protein.
Length = 3595
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 2897 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 2955
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 2956 QLLNESQQKIESQRML 2971
>AC004013-1|AAB96867.2| 2058|Homo sapiens unknown protein.
Length = 2058
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 1419 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 1477
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 1478 QLLNESQQKIESQRML 1493
>AB018346-1|BAA34523.1| 1708|Homo sapiens KIAA0803 protein protein.
Length = 1708
Score = 31.5 bits (68), Expect = 2.8
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S ++ EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 1010 TLASEQKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 1068
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 1069 QLLNESQQKIESQRML 1084
>Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61)
protein.
Length = 959
Score = 31.1 bits (67), Expect = 3.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 158 YSSVAKH*WSLGWHPNSEGPVSLSSPGVPIELVSATSTF 42
Y+ V W LGW P G + P +P+E + F
Sbjct: 549 YTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVF 587
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 31.1 bits (67), Expect = 3.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 158 YSSVAKH*WSLGWHPNSEGPVSLSSPGVPIELVSATSTF 42
Y+ V W LGW P G + P +P+E + F
Sbjct: 2410 YTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVF 2448
>AB019691-1|BAA78718.1| 3899|Homo sapiens Centrosome- and
Golgi-localized PKN-associated protein (CG-NAP) protein.
Length = 3899
Score = 31.1 bits (67), Expect = 3.7
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 TLKSPRRAQLELLASLEKQVLQNLGASRD-STSVLQQMSTLIKSRKERNLPLDNLLALII 220
TL S + EL +LEK+ + LG S + L+ + ++S+K+RNL L+ LL
Sbjct: 3201 TLASEHKKSRELQWALEKEKAK-LGRSEERDKEELEDLKFSLESQKQRNLQLNLLLEQQK 3259
Query: 221 HIYSLGGTEVTSQKLM 268
+ + ++ SQ+++
Sbjct: 3260 QLLNESQQKIESQRML 3275
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 31.1 bits (67), Expect = 3.7
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 158 YSSVAKH*WSLGWHPNSEGPVSLSSPGVPIELVSATSTF 42
Y+ V W LGW P G + P +P+E + F
Sbjct: 2410 YTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVF 2448
>AL591507-1|CAI39952.1| 983|Homo sapiens RP3-398G3.1 protein.
Length = 983
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 14 ILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLP 193
+LQ + + Q L+S A AS K V ++ +++ ++ QQ +++ KER
Sbjct: 849 VLQEHMDLCQALESLSSAITAFSASARKVVNRD-SCVQEAAALQQQYEDILRRAKERQTA 907
Query: 194 LDNLLA 211
L+NLLA
Sbjct: 908 LENLLA 913
>AL049548-1|CAI42743.1| 983|Homo sapiens RP3-398G3.1 protein.
Length = 983
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 14 ILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLP 193
+LQ + + Q L+S A AS K V ++ +++ ++ QQ +++ KER
Sbjct: 849 VLQEHMDLCQALESLSSAITAFSASARKVVNRD-SCVQEAAALQQQYEDILRRAKERQTA 907
Query: 194 LDNLLA 211
L+NLLA
Sbjct: 908 LENLLA 913
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 14 ILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLP 193
+LQ + + Q L+S A AS K V ++ +++ ++ QQ +++ KER
Sbjct: 1598 VLQEHMDLCQALESLSSAITAFSASARKVVNRD-SCVQEAAALQQQYEDILRRAKERQTA 1656
Query: 194 LDNLLA 211
L+NLLA
Sbjct: 1657 LENLLA 1662
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 14 ILQLALAVVQTLKSPRRAQLELLASLEKQVLQNLGASRDSTSVLQQMSTLIKSRKERNLP 193
+LQ + + Q L+S A AS K V ++ +++ ++ QQ +++ KER
Sbjct: 1591 VLQEHMDLCQALESLSSAITAFSASARKVVNRD-SCVQEAAALQQQYEDILRRAKERQTA 1649
Query: 194 LDNLLA 211
L+NLLA
Sbjct: 1650 LENLLA 1655
>BC010707-1|AAH10707.1| 334|Homo sapiens C17orf85 protein protein.
Length = 334
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 378 SKNIEATKGNSIDEDKFAEIQLVNKDKRDRNRARIPRPVTAASRDL 515
S NI+ GN + +KFA+++ + +KR +R R PV++ D+
Sbjct: 161 SSNIKNRIGNKLPPEKFADVRHLLDEKRQHSRPR--PPVSSTKSDI 204
>AJ277841-1|CAB91001.1| 340|Homo sapiens ELG protein protein.
Length = 340
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 378 SKNIEATKGNSIDEDKFAEIQLVNKDKRDRNRARIPRPVTAASRDL 515
S NI+ GN + +KFA+++ + +KR +R R PV++ D+
Sbjct: 167 SSNIKNRIGNKLPPEKFADVRHLLDEKRQHSRPR--PPVSSTKSDI 210
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,128,285
Number of Sequences: 237096
Number of extensions: 1908502
Number of successful extensions: 4458
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4458
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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