Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30503
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.57 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.57 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   9.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTII 373
           L KLK   +LG  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTII 373
           L KLK   +LG  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 388 QRFHQEHDHRNLS 426
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 282  NTQAYLKDPYPFPGPPSRTSRW 217
            +T ++ K   P   PPS T+ W
Sbjct: 1162 STSSWQKPTKPSYRPPSTTNHW 1183


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 678 PGVCSPIFPWM 646
           PGV  P +PWM
Sbjct: 108 PGVNVPEYPWM 118


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 678 PGVCSPIFPWM 646
           PGV  P +PWM
Sbjct: 108 PGVNVPEYPWM 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,916
Number of Sequences: 336
Number of extensions: 3730
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)