Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30503
(681 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 162 2e-40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 162 2e-40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 162 2e-40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 162 2e-40
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 101 3e-22
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 86 2e-17
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 3e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 3e-10
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 43 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 43 2e-04
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 40 0.001
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 38 0.006
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.033
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 36 0.033
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.057
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.057
At5g13650.2 68418.m01585 elongation factor family protein contai... 33 0.13
At5g13650.1 68418.m01584 elongation factor family protein contai... 33 0.13
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.17
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.23
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.31
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.31
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.40
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.40
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.6
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.6
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.6
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.2
At5g27540.1 68418.m03297 GTP-binding protein-related low similar... 29 2.8
At3g54030.1 68416.m05974 protein kinase family protein contains ... 28 5.0
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.0
At3g21960.1 68416.m02770 receptor-like protein kinase-related co... 27 8.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
SFKYAWVLDKLKAERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA 112
Query: 440 VLIVAAGTGEFEAGISKNGQTREMPCSLSPLGVK 541
VLI+ + TG FEAGISK+GQTRE LGVK
Sbjct: 113 VLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Score = 97.1 bits (231), Expect = 9e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
SFKYAWVLDKLKAERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA 112
Query: 440 VLIVAAGTGEFEAGISKNGQTREMPCSLSPLGVK 541
VLI+ + TG FEAGISK+GQTRE LGVK
Sbjct: 113 VLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Score = 97.1 bits (231), Expect = 9e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
SFKYAWVLDKLKAERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA 112
Query: 440 VLIVAAGTGEFEAGISKNGQTREMPCSLSPLGVK 541
VLI+ + TG FEAGISK+GQTRE LGVK
Sbjct: 113 VLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Score = 97.1 bits (231), Expect = 9e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 162 bits (393), Expect = 2e-40
Identities = 77/94 (81%), Positives = 82/94 (87%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
SFKYAWVLDKLKAERE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCA
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA 112
Query: 440 VLIVAAGTGEFEAGISKNGQTREMPCSLSPLGVK 541
VLI+ + TG FEAGISK+GQTRE LGVK
Sbjct: 113 VLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Score = 97.1 bits (231), Expect = 9e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 101 bits (243), Expect = 3e-22
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 430
G GSF YAW LD+ ERE GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QA
Sbjct: 282 GKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQA 341
Query: 431 DCAVLIVAAGTGEFEAGISK-NGQTREMPCSLSPLGVK 541
D A+L++ A G FEAG GQTRE L GV+
Sbjct: 342 DAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVE 379
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +3
Query: 120 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GK
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK 283
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
S+ A+++D + ER G T+++ FET TI+DAPGH+ ++ NMI+G SQAD
Sbjct: 147 SWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIG 206
Query: 440 VLIVAAGTGEFEAGISKNGQTREMPCSLSPLGV 538
VL+++A GEFE G + GQTRE LGV
Sbjct: 207 VLVISARKGEFETGYERGGQTREHVQLAKTLGV 239
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +3
Query: 114 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 260
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+D ER GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 461 TG 466
G
Sbjct: 177 DG 178
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 102 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 236
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+DK E++ GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 461 TG 466
G
Sbjct: 165 DG 166
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 111 KEKTHINIVVIGHVDSGKSTTT 176
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+D + ERE GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 461 TGEFEAGISKNGQTR 505
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGI 206
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+D + ERE GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 461 TGEFEAGISKNGQTR 505
G I+ + Q R
Sbjct: 168 GGVQSQSITVDRQMR 182
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGI 206
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 281 LDKLKAERELGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 448
LD + ERE GITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 449 VAAGTG 466
V A G
Sbjct: 183 VDASQG 188
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 227
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+D L E+ IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 461 TG 466
G
Sbjct: 109 EG 110
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGG 203
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFET-------SKYYVTIIDAPGHRDFIKNMITGTSQADCA 439
LDKL+ ER + + A +E S Y + +ID PGH DF + S A
Sbjct: 103 LDKLQRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGA 162
Query: 440 VLIVAAGTG 466
+L+V A G
Sbjct: 163 LLVVDAAQG 171
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 102 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 212
K EK N +I H+D GKST L+ G I K
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 281 LDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 460
+D ++ E+E GITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 461 TG 466
G
Sbjct: 196 AG 197
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 117 KTHINIVVIGHVDSGKSTTTGHLIYKCG 200
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 278 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
++D ERE GITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 458 GTG 466
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 278 VLDKLKAERELGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
++D ERE GITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 458 GTG 466
G
Sbjct: 179 VEG 181
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 371 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREMPCSLSPLGVK 541
I GH D+ + T Q +C + L+V TG F +KNG R+ PLG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAE 283
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 341 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 350 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCG 200
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g27540.1 68418.m03297 GTP-binding protein-related low similarity
to Mig-2-like GTPase Mtl [Drosophila melanogaster]
GI:7271872; contains Pfam profile PF00036: EF hand
Length = 648
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +2
Query: 350 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREMPCSLSP 529
++Y +D PG ++ ++ G + LIVAA T F + ++P P
Sbjct: 2 ARYAAGAVDCPGSPKSVRIVVVGDKGTGKSSLIVAAATDSFPPNVPPVLPDYKLPIEFFP 61
Query: 530 LGV 538
G+
Sbjct: 62 DGI 64
>At3g54030.1 68416.m05974 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 490
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 632 PPFLEFPLKNLGSLYGGFSGTHLVYSYDE 546
P F EF L+ L S GGFS ++V + E
Sbjct: 36 PTFKEFKLEQLKSATGGFSSDNIVSEHGE 64
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 287 KLKAERELGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 454
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 455 AGTG 466
A G
Sbjct: 585 ADDG 588
>At3g21960.1 68416.m02770 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; belongs to a family which includes
receptor-like kinase family proteins
Length = 262
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 375 SMMVT*YLLVSNFQRAISIVIPSSRSAFSLSNTQAYL 265
S VT +L+ ++ +++ +PS S SL+ T AYL
Sbjct: 4 SSSVTKHLISASILAIVAMQLPSVHSVLSLNETNAYL 40
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,548
Number of Sequences: 28952
Number of extensions: 333285
Number of successful extensions: 950
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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