Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30502
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    30   0.011
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   2.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.8  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +1

Query: 337 NINILDLSHNNITKLNHELDRLTEVVT-LDLSTNGIQNL-NKFLHSAQKLVHLNLANNRE 510
           ++ +LDLSHN++ +L+ +  R T+ +  LD S N I  + N        L  ++ ++NR 
Sbjct: 273 HLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRL 332

Query: 511 KNSP 522
           ++ P
Sbjct: 333 RSLP 336



 Score = 29.5 bits (63), Expect = 0.019
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +1

Query: 337 NINILDLSHNNITKLNHELDRLTE--VVTLDLSTNGIQNLNKFLH-SAQKLVHLNLANN 504
           NI +LDLS NNIT +  +  R  E  ++ L L  N + N  K L  +   L  L+L++N
Sbjct: 224 NIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHN 282



 Score = 29.1 bits (62), Expect = 0.026
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +1

Query: 349 LDLSHNNITKLNH--ELDRLTEVVTLDLSTNGIQNLNK-FLHSAQKLVHLNLANNRE 510
           LDLS N+I+ L+H  +L R   +  LDLS N +  ++        +L  LNL +N +
Sbjct: 374 LDLSWNSISSLSHGGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQ 430


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 512 FSLLFAKFKCTNFC 471
           F L+F  F+CT  C
Sbjct: 148 FDLIFLSFRCTKLC 161


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 227 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 114
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 227 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 114
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIKCLKSRP 262


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 227 LLSWEPLVVTPPGNTRKQESTSSCQHLEDVISCIESFP 114
           L+ W  L+  P   T+K  +   C   E +I C++S P
Sbjct: 226 LVPWA-LMEQPLAQTKKLATIVGCGTDETMIRCLKSRP 262


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 60  KKKKRFCYHF 89
           KK KR+CY++
Sbjct: 108 KKTKRYCYYY 117


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 176 QESTSSCQHLEDVISCIESFPLAHRM 99
           +ES S  +H E V+   +S  L HR+
Sbjct: 197 EESISKYKHAELVMPLCKSCDLHHRL 222


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 331 HHNINILDLSHNNITKLNHELDRLTEVV 414
           HH +N   L+H  +     +LD +  +V
Sbjct: 260 HHLVNPQSLNHQEVKAECSDLDSVDNIV 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,032
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)