Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30502
(532 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 41 7e-04
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 38 0.007
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 38 0.007
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 36 0.016
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 36 0.027
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 35 0.036
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 35 0.036
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.063
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 33 0.14
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 33 0.19
SB_23093| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 32 0.25
SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_17080| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 29 1.8
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 29 1.8
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09) 29 3.1
SB_693| Best HMM Match : efhand (HMM E-Value=2e-09) 29 3.1
SB_24067| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 28 4.1
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 28 5.4
SB_26558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59731| Best HMM Match : ResIII (HMM E-Value=6.4) 27 7.2
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 27 7.2
SB_47755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_45322| Best HMM Match : LRR_1 (HMM E-Value=0.0018) 27 7.2
SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_12717| Best HMM Match : CheR (HMM E-Value=5.6) 27 7.2
SB_41458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_16594| Best HMM Match : DUF1265 (HMM E-Value=2.6) 27 9.5
SB_14412| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3) 27 9.5
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 27 9.5
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 40.7 bits (91), Expect = 7e-04
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQ----NLNKFLHSAQKLVHLNLANN 504
NI L+ SHN I ++NH L+ L+E+ LDLS N ++ NLN L + +K LNLANN
Sbjct: 971 NIESLNWSHNCIEEINH-LESLSELEVLDLSHNKLRAIPTNLNAKLGNIRK---LNLANN 1026
Query: 505 R 507
+
Sbjct: 1027 Q 1027
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 334 HNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREK 513
HN+ L +N + L ++ LTE+ L+L+ N ++ L+ L KL L A NR +
Sbjct: 478 HNLRFLHCDYNVLESLPDQMGSLTELEVLELTHNKLEKLSASLGLLNKLKCLKFAKNRLR 537
Query: 514 NSP 522
P
Sbjct: 538 FPP 540
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 37.5 bits (83), Expect = 0.007
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Frame = +1
Query: 256 TTRDGLHRATCS-NLAELYKFTLRQK---HHNINILDLSHNNITKLNHELD-------RL 402
T D + R T ++ + +L QK + ++ ++DLS N I L D L
Sbjct: 913 TLEDNMLRKTFPLKRRKMSRASLNQKMLTNASVRVIDLSRNGIGDLQPIADAGEYLLMHL 972
Query: 403 TEVVTLDLSTNGIQNLNKFLHSAQ-KLVHLNLANNREKNSP 522
V LDLS N +Q+ LH A KL H+NL++N + P
Sbjct: 973 RNVERLDLSGNFLQDFPPLLHEAMPKLEHMNLSHNEFETFP 1013
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLD---LSTNGIQNLNKFLHSAQKLVHLNLANN 504
N+++L+L H+N+T ++H+L + E L+ L N +++L + L + Q L L L++N
Sbjct: 56 NMSVLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDN 114
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 340 INILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANN 504
+ +++LS NNI KL L + + D++ N I+NL + SA L HL NN
Sbjct: 181 LEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERFESACFLEHLYADNN 235
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 340 INILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHL 489
++ LDLS N ITKL + L E+ TL L + + + + L HL
Sbjct: 277 LSSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHL 326
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 328 KHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNR 507
KH ++ L L + N+T + + L + LDL+ N + ++ + + KL +LNL NN
Sbjct: 520 KHKSLISLSLENCNLTSIPDVVFHLESLEKLDLNNNKLTSIPAGITNLTKLTNLNLENNN 579
Query: 508 EKNSPCHI 531
P ++
Sbjct: 580 ISVVPKYV 587
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANN 504
++ +LD+++N + L + L+ + TLD+ N +Q+L + + + L LN++NN
Sbjct: 88 SLQVLDVANNKLKSLPKAIGGLSSLQTLDVQGNNLQSLPLEIGNLKLLRSLNVSNN 143
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 319 LRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNL-NKFLHSAQKLVHLNL 495
L Q N+N LDLS N++ L LT++ L L + I L +F LV L+L
Sbjct: 76 LIQNSKNLNSLDLSFQNLSNFPTGLLELTQLEYLYLKGSQISALPEEFFRKLINLVWLDL 135
Query: 496 ANNREKNSP 522
+N+ +N P
Sbjct: 136 RDNQLENLP 144
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 33.1 bits (72), Expect = 0.14
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 289 SNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDR-LTEVVTLDLSTNGIQNL-NKFL 462
+NL EL K I+ LDLS N + + + R + V L L+ N ++ + N L
Sbjct: 13 TNLTELRKHF--DNTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASL 70
Query: 463 HSAQKLVHLNLANNR 507
+ L++LNLANN+
Sbjct: 71 SGLKSLLYLNLANNK 85
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 349 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANN 504
L+LSHN I ++ L L + +LDLS N ++L+ L L+L++N
Sbjct: 85 LNLSHNKIVVIDESLRLLPALESLDLSFNEFESLDLQEVDCPSLTQLDLSHN 136
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 349 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNR 507
LDLSHN+I ++ L + +L L+ N +Q+L+ L L+ L +A NR
Sbjct: 131 LDLSHNSIQFVSATPRDLRHLKSLILNHNNLQSLSG-LDCLVGLIELGIAENR 182
>SB_23093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +1
Query: 325 QKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVH 486
Q+ N N ++ + +N TK ++ ++R T V+ ST+ ++LNK ++ QK H
Sbjct: 23 QQTPNFNSMNEAKDNTTKKDYYVNRQTRVMEQITSTDSSRSLNKSENNLQKQQH 76
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNR 507
N+ L L +N I K+ LD L + LDLS N I+ + + L KL L L NNR
Sbjct: 66 NLTTLQLDNNIIEKIEG-LDMLVNLQWLDLSFNNIEVI-EGLDKLTKLKDLTLYNNR 120
>SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 31.5 bits (68), Expect = 0.44
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNL 495
N+ L L+ N I K+ LDRL + L L N I +L F + + L +LNL
Sbjct: 478 NLRELYLAANTIRKVEG-LDRLEHLTKLHLRDNQIDSLEGFSENMKNLQYLNL 529
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 337 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREKN 516
N+ LD+SHN + L + L + + + N IQ L + L L+L+ N+ +
Sbjct: 133 NLARLDISHNRLESLPEGIFNLELIAEIYAANNLIQALGNEVGCLHVLKVLDLSENKLEA 192
Query: 517 SPCHI 531
PC +
Sbjct: 193 IPCEL 197
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 358 SHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREKNS 519
++N I L +E+ L + LDLS N ++ + L KL LNL N K++
Sbjct: 163 ANNLIQALGNEVGCLHVLKVLDLSENKLEAIPCELADCLKLKDLNLKENPIKDN 216
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 340 INILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREKNS 519
+ +L++ N + + EL T + L L N + +L + KL +NLA+NR +
Sbjct: 504 LRVLNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYL 563
Query: 520 P 522
P
Sbjct: 564 P 564
>SB_17080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +1
Query: 238 RKLRLHTTRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVT 417
R+ R R G ++ N++ L TL +NI LD NNIT+L+ ++ +TE
Sbjct: 147 RRGRCFAERCGPEPSSVPNISSLQ--TLHPIVNNITELDPIVNNITELDSIINSITE--- 201
Query: 418 LDLSTNGIQNLNKFLHSAQKL 480
LD N I + ++S +L
Sbjct: 202 LDPIVNNITEIGPIVNSITEL 222
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 29.5 bits (63), Expect = 1.8
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Frame = +1
Query: 58 RKKKNDFAIILHYII--RC-ARGNDSMQLMTSSRC*HDDVDSCFLVFPGGVTTSGSQLSN 228
++KK+D L +I+ +C G D+ Q++ +S+C DD D+ ++ G
Sbjct: 511 KRKKDDSDESLQHIVAGKCIGDGKDNPQIIDASKCVSDDKDNPQVIDASKQVREGKDNIK 570
Query: 229 RLSRKLRLHTTRDGLHRATCSNLAELYKFTLRQKHHNINILDLS------HNNITK---- 378
L ++ +D + S +R+ NI +LD S ++NI K
Sbjct: 571 VLDASKQVREGKDNIKVLDASK-------QVREGKDNIKVLDASKHTRDNNDNIPKVTAS 623
Query: 379 ---LNHELDRLTEVVTLD 423
LN+E+D VVT++
Sbjct: 624 GKHLNNEIDENPGVVTIN 641
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 349 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNL 450
L L N I L + +L +VTLD+S N I+NL
Sbjct: 250 LSLRENKIKILPRVIGQLVHLVTLDISHNHIENL 283
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +1
Query: 124 SMQLMTSSRC*HDDVDSCFLVFPGGVT--TSGSQLSNRLSRKLRLHTTRDGLHRATCSNL 297
++ L T S H S F V P T T + L + + L T LH T
Sbjct: 23 TITLTTRSHSRHHPT-STFTVRPHNTTDYTHDTTLHDHTHDTITLTTPAHTLHYHTHVAT 81
Query: 298 AELYKFTLRQKHHNINILDLSHN 366
+ Y TL +H+ I ++ SH+
Sbjct: 82 TQHYNITLTTRHYTITLMTRSHS 104
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 340 INILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLN--KFLH-SAQKLVHLNLANNR 507
+ +L+LS N I L L+ L ++ LDLS N I+N++ K LH + L L L NR
Sbjct: 80 LRVLNLSCNRIY-LVEGLENLRKLTKLDLSYNFIENVSGLKDLHGNGYSLTTLYLHGNR 137
>SB_2973| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 508
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 TRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNIT-----KLNHELDRLTEVVTLD 423
TR L SN A Y L + +++ LDLS N+I ++ L+ ++ TL
Sbjct: 225 TRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNMKLKTLK 284
Query: 424 LSTNGIQN-----LNKFLHSAQKLVHLNLANNR 507
L+ NG+ L K L LV L+L++NR
Sbjct: 285 LAWNGVATDGAIALAKSLEGNTTLVELDLSSNR 317
>SB_693| Best HMM Match : efhand (HMM E-Value=2e-09)
Length = 500
Score = 28.7 bits (61), Expect = 3.1
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Frame = +1
Query: 259 TRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNIT-----KLNHELDRLTEVVTLD 423
TR L SN A Y L + +++ LDLS N+I ++ L+ ++ TL
Sbjct: 217 TRIDLSGNKFSNKACEYIGALLDESYSLEYLDLSWNHIQVKGAQRIAKGLEGNMKLKTLK 276
Query: 424 LSTNGIQN-----LNKFLHSAQKLVHLNLANNR 507
L+ NG+ L K L LV L+L++NR
Sbjct: 277 LAWNGVATDGAIALAKSLEGNTTLVELDLSSNR 309
>SB_24067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.3 bits (60), Expect = 4.1
Identities = 29/99 (29%), Positives = 41/99 (41%)
Frame = +1
Query: 226 NRLSRKLRLHTTRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLT 405
+RL +L +H+ R G +RA S LA ++ I S +N + H
Sbjct: 135 SRLKARLIVHS-RHGENRARTSPLA----------YNKQQIPPYSRHNARLIVHSRHGEN 183
Query: 406 EVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREKNSP 522
V T LS N QN H A+ +VH NR + P
Sbjct: 184 RVRTSPLSYNKQQNPPYSRHKARLIVHSRHGENRARTPP 222
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 331 HHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANN 504
+ + +LDL N +T + ++ L ++ LDL+ N I L + + L L L N
Sbjct: 126 YSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGN 183
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 445 NLNKFLHSAQKLVHLNLANN 504
NL F + +LVHLNL+NN
Sbjct: 152 NLEPFFQNRSQLVHLNLSNN 171
>SB_26558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 250 LHTTRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLS 429
LH GL ATC+ E + T+ + ++ DLS +++ R T V+ LS
Sbjct: 740 LHKLTSGLANATCTTDMENFVTTVDPQELMLSKSDLSTGTLSRAVRVAKRTTRKVSRALS 799
Query: 430 TN 435
N
Sbjct: 800 MN 801
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +1
Query: 256 TTRDGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTN 435
T D L C E +K H + L L + N+ + + + + + LDLS N
Sbjct: 437 TELDSLLLENCILTEEDFKRKNWANFH-LRSLSLINCNLESIPDAILKQSSLKKLDLSRN 495
Query: 436 GIQNLNKFLHSAQKLVHLNLANNR 507
I+++ + L LNLA+N+
Sbjct: 496 RIKSIPAQIEELSNLETLNLASNK 519
>SB_59731| Best HMM Match : ResIII (HMM E-Value=6.4)
Length = 230
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 373 TKLNHELDRLTEVVTLD 423
++L H+LDRLTEV+ +D
Sbjct: 87 SELGHKLDRLTEVIIID 103
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 328 KHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNR 507
K + +L LS N I L +L+ L + L L N + +L K LH +++ NN
Sbjct: 188 KLEKLQVLILSDNEIGALPADLNALENLRELYLDDNRLMSLPKKLHEFLTGLYILDINNN 247
Query: 508 EKN 516
N
Sbjct: 248 AGN 250
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 373 TKLNHELDRLTEVVTLD 423
++L H+LDRLTEV+ +D
Sbjct: 4208 SELGHKLDRLTEVIIID 4224
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 307 YKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVH 486
Y+F++ H + LDLS+N I L L + TL ++ N ++ L +L
Sbjct: 77 YEFSMYLPH--LVHLDLSYNRIGFLPDSFGYLFHLETLFINNNKLRELPDTFCYLARLQK 134
Query: 487 LNLANNREKNSPCHI 531
L+L++N+ + P +I
Sbjct: 135 LDLSHNQLLHLPENI 149
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 349 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHSAQKLVHLNLANNREKNSP 522
LDLSHN + L + + ++++++S N ++ L + S K + L LA +SP
Sbjct: 135 LDLSHNQLLHLPENIGLMESLLSINVSYNELEALPASI-SKSKTLKLILAIFNNCSSP 191
>SB_47755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Frame = +1
Query: 319 LRQKHHNINILDLSHNNI---------TKLNHELDRLT--EVVTLDLSTNGIQNL-NKFL 462
L ++ +N LD+SHN+I L HE +LT ++ + + G +N+
Sbjct: 254 LAHENCKLNHLDISHNSIEDKRTNYIGAALRHENCKLTQLDISFIGIGDEGAKNIVGALR 313
Query: 463 HSAQKLVHLNLANN 504
H KL LN+++N
Sbjct: 314 HEYCKLTQLNISDN 327
>SB_45322| Best HMM Match : LRR_1 (HMM E-Value=0.0018)
Length = 250
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Frame = +1
Query: 319 LRQKHHNINILDLSHNNI---------TKLNHELDRLT--EVVTLDLSTNGIQNL-NKFL 462
L ++ +N LD+SHN+I L HE +LT ++ + + G +N+
Sbjct: 119 LAHENCKLNHLDISHNSIEDKRTNYIGAALRHENCKLTQLDISFIGIGDEGAKNIVGALR 178
Query: 463 HSAQKLVHLNLANN 504
H KL LN+++N
Sbjct: 179 HEYCKLTQLNISDN 192
>SB_44274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 394 DRLTEVVTLDLSTNGIQNLNKFLHSAQKLVH 486
DR+TE L L ++ +NL LH Q+L H
Sbjct: 32 DRMTETWQLILDSDKEENLKPLLHKYQQLSH 62
>SB_12717| Best HMM Match : CheR (HMM E-Value=5.6)
Length = 685
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 178 FLVFPGGVTTSGSQLSNRLSRKLRLHTTRDGLHRATCSNLAELYKFTLRQKHHNINI--- 348
+L GG + +S R + + T + L C+N + HHN+ +
Sbjct: 534 YLAGQGGPGKTEWAVSMFRGRNVVVLTPENDLAHDHCNNPRLACAERAQTYHHNLFVPAE 593
Query: 349 LDLSHNNITKLNHELDRLTEVVTLD 423
+ ++L H+LDRL EV+ +D
Sbjct: 594 KPIEEWRPSELGHKLDRLAEVIIID 618
>SB_41458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 373 TKLNHELDRLTEVVTLDLSTNGIQNLNKFL 462
++L H+LDRL EV+ +D +T ++ + +L
Sbjct: 768 SELGHKLDRLAEVIIIDDATKVLRAILGYL 797
>SB_16594| Best HMM Match : DUF1265 (HMM E-Value=2.6)
Length = 734
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 373 TKLNHELDRLTEVVTLD 423
T+L H+LDRL EV+ +D
Sbjct: 341 TELGHKLDRLAEVIIID 357
>SB_14412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 373 TKLNHELDRLTEVVTLD 423
+KL H+LDRL EV+ +D
Sbjct: 624 SKLGHKLDRLAEVIIID 640
>SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3)
Length = 360
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 265 DGLHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNH 387
D L RATC+ L+E L Q H + L H+ +T+LNH
Sbjct: 244 DTLSRATCATLSE---DPLYQLHES-----LCHSGVTRLNH 276
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +1
Query: 358 SHNNITKLNHEL--DRLTEVVTLDLSTNGIQNLN-KFLHSAQKLVHLNLA 498
++ ++K+N +L D+L + TL+ + IQNLN ++ ++KL N+A
Sbjct: 132 NYTRVSKINEQLEADKLELLSTLERKNHEIQNLNVEWNTMSEKLSAANIA 181
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,226,892
Number of Sequences: 59808
Number of extensions: 320916
Number of successful extensions: 1324
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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